Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1023 ATGGCGCTTGTAACCTCTCAAACTGTCAACGATGGGCCTTTGTTCGCCGAGGTTGATATGGGCCCCGATAACAACGCCACTACTGTACGAGCCACCGTCGTTCAGGCCTCTACCGTCTTCTACGATACCCCCGCCACTTTAGATAAGGCGGAGAGATTGTTGGCTGAAGCTGCAAGCCATGGATCCCAGCTGGTTGTGTTTCCGGAAGCATTTGTGGGCGGCTATCCCCGTGGTTCTAACTTCGGTGTTTGCGTTGGAAATCGGACAGCTAAGGGTAAAGAGGAATTTCGCAAGTATCATGCTGCAGCCATTGATGTCCCAGGTCCTGAAGTTGATAGATTGGCGGCAATGGCTGGGAAGTATAAGGTGTATTTGGTAATGGGTGTGATAGAGAGAGATGGCTACACATTGTATTGCACGGCTCTCTTCTTTGGTTCTCAAGGTCGTTACCTTGGAAAGCACAGGAAAGTTATGCCAACCGCGATGGAAAGGATTATCTGGGGATTTGGGGATGGATCAACCATCCCAGTTTTCAAAACTCCCTTTGGAAAAATAGGTGCTGCCATTTGCTGGGAGAACAAAATGCCTCTTTTGAGGACAGCCATGTATGCAAAAGGTGTTGAGATATATTGCGCCCCTACAGCTGATGCTAGGGAGTTGTGGCAAGCATCTATGACCCATATTGCTCTAGAAGGAGGATGCTTTGTTCTGTCCGCAAACCAGTTCTGCAGAAGGAGAGATTACCCGCCTCCTCCCGAGTATGTTTTCTCAGCCACAGAAGAGGACTTGACACCAGATTCTGTTGTATGTGCCGGGGGTAGTGTTATCATATCACCTTCAGGGGCTGTTCTGGCTGGACCAAATTACGAAGGGGAGGCTCTGATCTCAGCAGATCTCGATATGGGAGAAATAGCGAGGGCAAAGTTTGATTTTGACGTGGTGGGACACTACTCAAGGCCTGAAGTGCTGAGCTTGAAGGTGAGGGACCAGCCAACAAACCCAGTTATTTTCACATCAGCATCCTCAAAAATTGAGGACCCTCCCAAATCATGA 1053 0.491 MALVTSQTVNDGPLFAEVDMGPDNNATTVRATVVQASTVFYDTPATLDKAERLLAEAASHGSQLVVFPEAFVGGYPRGSNFGVCVGNRTAKGKEEFRKYHAAAIDVPGPEVDRLAAMAGKYKVYLVMGVIERDGYTLYCTALFFGSQGRYLGKHRKVMPTAMERIIWGFGDGSTIPVFKTPFGKIGAAICWENKMPLLRTAMYAKGVEIYCAPTADARELWQASMTHIALEGGCFVLSANQFCRRRDYPPPPEYVFSATEEDLTPDSVVCAGGSVIISPSGAVLAGPNYEGEALISADLDMGEIARAKFDFDVVGHYSRPEVLSLKVRDQPTNPVIFTSASSKIEDPPKS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1023 350 Gene3D - 19 313 IPR036526 -
Lele30g1023 350 SUPERFAMILY Carbon-nitrogen hydrolase 27 327 IPR036526 -
Lele30g1023 350 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 186 199 IPR000132 GO:0003824
Lele30g1023 350 Pfam Carbon-nitrogen hydrolase 30 308 IPR003010 GO:0006807
Lele30g1023 350 CDD nitrilases_CHs 29 329 IPR044149 GO:0003824
Lele30g1023 350 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 61 76 IPR000132 GO:0003824
Lele30g1023 350 PANTHER NITRILASE 13 343 IPR044149 GO:0003824
Lele30g1023 350 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 29 301 IPR003010 GO:0006807
Lele30g1023 350 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 19 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1023 Lele-ChrLele30 13629286 13631514 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1023 30 13629286 13631514 Lele31g1155 31 18137882 18140110 hybridization
Lele30g1023 30 13629286 13631514 Lele32g0369 32 2295792 2298055 hybridization