Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1007 ATGTGTTACTACTTGTTTCCTCCAATAACCGCGAAGACAACAATGGCCTCTCCGGCTCCAGAAAATGTCACTAACTACGGTGCTTCTCGTGGAATGCGATGGCTTAGGGCCTTGCCTTGTAAATCATTGCATGTGCTTCTGAGATTTGGAAAGAAATCAGCCAAAATAGCGAAAGATGATCCTCGAAGAGTCACTCATTCTCTGAAGGTAGGCTTGGCACTCACCGTCGTTTCCTTGTTCTTCTTCCTCCGCCGTCTTTACGACAGTTTTGGCGATAACGCCCTCTGGGCCGTCATGACTGTCGTCGTCGTCATGGAATTTTCTGTCGGAGCAACTCTGGGGAAAGGGCTGAATAGAATGTTGGCGACCTTGCTGGGAGGTTTTTCTGGTGTTGCGGTTCAACAATTATCAACTTTGTCTGGGGGAAAGCAGAAGCCTATCCTAATTGCACTCTTCCTCTATATCATAGGGGCGCTTATAACGTTTATGAGATTTTTTCCACAAGTGAAGGCGAGATATGATTATGGGTTAACAATATTTATATTAACATTCAGCCTTGTATTAGTATCTGGATATCGAGAAGATCAGATACTTGATCTTGCATTCAGGAGGCTTTCAACCATCATCATTGGCAGCTTTATAGCTATCATTATCTGTGTTTTCTTGTTCCCTGCTTGGAGCGGCGACGATCTTCACAATCTGCTAGCTACTAACTTGGAAAAGCTTGGCAATTTCTTGGAAGGCTTTGGAACTGATGACTTAAAACCCGAGAGTGAGAGATCCTTTGCGAAAGAATATGAAAGTGTTCTCACCTCTAAAACCAGAGAAGAAACCCTGGCCAATTTTGCAAGATGGGAGCCTTGTCATGGCCAAATAAGATTCCGTCATCCATGGCAGAAATGCCTGGAACTTGGCAACTTAACACGGCAATGCGCTTATAAAGCTGAAGCTCTAGATGTTTATCTCAGGTATTTGATCAAGACAAGTAATCAAGTTGGGCTCAACATAAAGGATTCGTGCCAATCTGCAAGCTTAGAATGTGGAAAAGCATTGAAGATGTTATCTTCGTCAGTTAAATCAATGACTTGTTTACCACCAACAACAACGAAGGCTGGTATTGAAAAAGCAAAAGGTTCCATCGAATTGATTCATTCTGTTTTAAGATCAAAACCATGTTGGGAAGGCGTTGATGAGCTCAAGGATATAGTGGCGGCTGCTGCAGTTACTTCACTACTCAGTGATATGGTGATATGCATCGAGAGAATCATCGAAGCATTTGATGAACTTTCCAACTTAGCACATTTCAAGTGTTCTGTGATGCTTTCCACAACCAGGACGACGTCAACTACTTCTTCAAAACCTCTACCTCTGACTCGTGAGGGGATTATGAAGCCTGTTTTGGAATCTCATGATGAATTAAGTTATTGTGCAGTCACAATTAACGATGGTTATTCTTCAGCTTCAACGAAAGAAAAAGCCGAAGTGGTGCATCCATAG 1497 0.4275 MCYYLFPPITAKTTMASPAPENVTNYGASRGMRWLRALPCKSLHVLLRFGKKSAKIAKDDPRRVTHSLKVGLALTVVSLFFFLRRLYDSFGDNALWAVMTVVVVMEFSVGATLGKGLNRMLATLLGGFSGVAVQQLSTLSGGKQKPILIALFLYIIGALITFMRFFPQVKARYDYGLTIFILTFSLVLVSGYREDQILDLAFRRLSTIIIGSFIAIIICVFLFPAWSGDDLHNLLATNLEKLGNFLEGFGTDDLKPESERSFAKEYESVLTSKTREETLANFARWEPCHGQIRFRHPWQKCLELGNLTRQCAYKAEALDVYLRYLIKTSNQVGLNIKDSCQSASLECGKALKMLSSSVKSMTCLPPTTTKAGIEKAKGSIELIHSVLRSKPCWEGVDELKDIVAAAAVTSLLSDMVICIERIIEAFDELSNLAHFKCSVMLSTTRTTSTTSSKPLPLTREGIMKPVLESHDELSYCAVTINDGYSSASTKEKAEVVHP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1007 498 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 41 436 - -
Lele30g1007 498 Pfam Aluminium activated malate transporter 55 430 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1007 Lele-ChrLele30 13537108 13539001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1007 51 439 Miscellaneous Gene Families AT2G27240 48.635 1.28e-124 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1007 30 13537108 13539001 Lele32g0384 32 2378477 2380315 hybridization