Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0956 ATGGAATGCGGATACATGATGCGAGTGGCGTTTGTGATCGCTTCTTTAGCGGTTGTGTCCATCTACTTTACTGCTCGGTATCGGAGTCGGCGTAAGAAGAAGTATCCACCGAGTTTGTGTTACTTACATGCCGACCCAAAGGAACAGTATGCTTTTAAACGAGTATTAGCCGATAACTCGTACACTGTGTTCAAGCACTTGAAGCTCAACAACTCTAGCTCTAGCGATGGAATTTCAATTTTGACCGCAGCAAGTGGTTACTTGGTGAACGAATATTTTGATCAAGCTAAGTTTATTGTTGTTTTCACAGAGAGGCCTTCAAATTCCCATCCTTTTGAGGCAGAGATTACAGCATTACTTAAAGACCCTCAGCCTCAATTAGAATTCAGTACTGGGATTGAGGAACTGAAGAAGAAAGATACATATGTTTGGATTGATACAGAGTTGCAATTGAAGGACCTTGTCAATGTATTAAATAAAGAGAGATTCTTTGTTGTGGACACAGAACAACAAACTTTGCGATCTTTTCTCGGCTTTACAGCATTAATTCAGATTTCTACTCAGCAGGAGGATTATTTGATTGACACAATTGCCCTGCATGATTTCATGGTCATTCTTTGCCCGGTTTTTGCAAATCCTTTAATTTGTAAAGCATGTGAGGTGCTGTCAAAGCCACAGAAATCACTCGCTTATCTACTTGAAACTTATTGTGGTGTTACGACAAATAAATTATATCAGCATGTTGCATTGGATGAAGAGCCTCCCTTTACGCTTTCTGAAATTTGTTTCATCAAAATTCAAAATTCTGAATTTATTGTATCAGAAAACTCTGGTTCCGATGATAAATTCCATTTTCTTCACGAGGCTAGTCAACATTTCAATATGACTTGTTTGCAACTTTTCACAAAAGAGATTGGAGCTTCTCTTGGGGAATCTGCTGCATTATCATTATTTTCACGATATGTGGGTGGTGCGAGTTCTTCAGTTTCCAGAGAAACCCAGTTTCAGAATATTGTGAGGCGACTATGTGCATGGAGAGATCTGATGGCTCGTGTCCATGATGAGAGCTTGAAATATGTATTATCAGACCAGTCAATTGTTGCTTTGGCAAATCAACCTCCTACAAGTGACTCTGAAATATGCAATGTCATGGCTCAAGCTGATGTCAATATAGAAATGGGTGTCAATTCTTTCTTCTCTTCTCCATCTCCTATTGTTGGCAGCCACCTAAGTGATGTTTATGATTTGCTTACAGACAATTTAGGTAACACTGAAGATATTTATTCAGTAATTCTTCAGAAGTGCCTTGCCATCGTGCTCATGATATTGTCCTGCTTTGCGTGGACTGTCATGAAGTTGCCCATGCTGCCGCAGAGAAATACGAGAGAGATAGCAGCTGAATTTGAGATTCCTCTCTATGTTCAGAGGGTAATTGATCCAGGACAAGCATCTGAAGTAACCTTTGAAGAGGGAGGTGTTTCTCCCTTACAGTTGCGAACAGCAGCCATGGCTCTTCTGCGCCATGGACCAAGAATGTCTCCTAATCGCCATGATGAATTGGCTGAGATTGTGAAGAGGTACTATGGAGGAAGGGAGATATCTGAGGAAGGTTTGGAGAGAGCATTGCTAGTTGGCATGAGTCCACATGAGAGAAGACAATTTGAGAAGAAGAGAGTATATTCATTTAAACATTTAAATAGAGGTGCTGCTGTGCAGACGGTACAGGAAAAGCATGGTGATTGCACACCCAGAATGCGAGTTGTGGACACGTTAAATTTTATTGCTCTAGATGTTGTCAATATTGTGTGCTATGAGAGTTCTTGGGATGAACACAAGAAGATAGTTGAGAGGCCGCTTGGATTTTCCTATTTAGTGGCTTATGAGTCGGAGGTTTTTGTTGAGGATTTGTGTTATATTGCTGGTTATTACATGATTGAGCATTCTTATGCTGCTAGGATGTTCTACTTCTTTGAATCTCACAACAACAACCAGAACCCTTTTGTGCTTTGGGGGACGGGAGGAGCTGGTTGTAGCAGCGAGTTGGCAATGTCTTATGAAAATGACCCTTTCAAAATTGCTAACATGTTCTTTTTGTGGATTGACTATGGGTGGGATCGGGTTCCTAATCTTCTGTATGGGGACCAACTTAATGGGAATGGTTTTAGTTATAACACTGCTAATGACCCTGACACTGGGTATAATGAAGTGGGAGTTGGCAATGACCTCTATGACTTCATGCAGGCCTTCTTTGCTGTATATTATATCCCTGTACTTACAGCTCAACTCCATAAGGGAAACAAAGCTAAAGAAGGAAGCCATATAAATATGAAAGATTACTGCTGTGTGCTTGGGATTTTGTTGCCCATTGCTATAGTCTTCTACTTGTTTTTTCTGTTGAACGAGGAACTGAAGGCGAAGTTTGTTGGAGCTTTGCAAGTAGTCATGGCAACAAGCAATGGAGTGGGTAGAGAAATTATTATGGCAAAAGATGATGTTGAAAACCCCAATGTATCTTCTGATGTAGGAATTGATGGAGCTGTCTCTGTTATCTCAACTGAACATGTGAGCACAGATGAAAATTCAGCTTCTAATGAGTTAAGTGCCTCTGCTGTAAATCCTGACAAGGACTCCAAATGGAATTGA 2643 0.4064 MECGYMMRVAFVIASLAVVSIYFTARYRSRRKKKYPPSLCYLHADPKEQYAFKRVLADNSYTVFKHLKLNNSSSSDGISILTAASGYLVNEYFDQAKFIVVFTERPSNSHPFEAEITALLKDPQPQLEFSTGIEELKKKDTYVWIDTELQLKDLVNVLNKERFFVVDTEQQTLRSFLGFTALIQISTQQEDYLIDTIALHDFMVILCPVFANPLICKACEVLSKPQKSLAYLLETYCGVTTNKLYQHVALDEEPPFTLSEICFIKIQNSEFIVSENSGSDDKFHFLHEASQHFNMTCLQLFTKEIGASLGESAALSLFSRYVGGASSSVSRETQFQNIVRRLCAWRDLMARVHDESLKYVLSDQSIVALANQPPTSDSEICNVMAQADVNIEMGVNSFFSSPSPIVGSHLSDVYDLLTDNLGNTEDIYSVILQKCLAIVLMILSCFAWTVMKLPMLPQRNTREIAAEFEIPLYVQRVIDPGQASEVTFEEGGVSPLQLRTAAMALLRHGPRMSPNRHDELAEIVKRYYGGREISEEGLERALLVGMSPHERRQFEKKRVYSFKHLNRGAAVQTVQEKHGDCTPRMRVVDTLNFIALDVVNIVCYESSWDEHKKIVERPLGFSYLVAYESEVFVEDLCYIAGYYMIEHSYAARMFYFFESHNNNQNPFVLWGTGGAGCSSELAMSYENDPFKIANMFFLWIDYGWDRVPNLLYGDQLNGNGFSYNTANDPDTGYNEVGVGNDLYDFMQAFFAVYYIPVLTAQLHKGNKAKEGSHINMKDYCCVLGILLPIAIVFYLFFLLNEELKAKFVGALQVVMATSNGVGREIIMAKDDVENPNVSSDVGIDGAVSVISTEHVSTDENSASNELSASAVNPDKDSKWN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0956 880 Pfam 3'-5' exonuclease 142 217 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lele30g0956 880 Gene3D HRDC domain 325 428 IPR044876 -
Lele30g0956 880 MobiDBLite consensus disorder prediction 855 880 - -
Lele30g0956 880 Pfam HRDC domain 336 380 IPR002121 GO:0003676
Lele30g0956 880 SMART hrdc7 332 417 IPR002121 GO:0003676
Lele30g0956 880 SUPERFAMILY HRDC-like 334 411 IPR010997 GO:0000166|GO:0044237
Lele30g0956 880 Gene3D - 46 220 IPR036397 GO:0003676
Lele30g0956 880 SUPERFAMILY alpha/beta-Hydrolases 638 805 IPR029058 -
Lele30g0956 880 SUPERFAMILY Ribonuclease H-like 94 246 IPR012337 -
Lele30g0956 880 ProSiteProfiles HRDC domain profile. 332 412 IPR002121 GO:0003676
Lele30g0956 880 Gene3D alpha/beta hydrolase 632 871 IPR029058 -
Lele30g0956 880 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 459 560 IPR045092 GO:0000175|GO:0000467
Lele30g0956 880 Pfam Serine carboxypeptidase 640 753 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0956 Lele-ChrLele30 13187225 13195091 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0956 30 13187225 13195091 Lele31g1095 31 17710109 17716321 hybridization
Lele30g0956 30 13187225 13195091 Lele32g0429 32 2724656 2725602 hybridization