Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0780 ATGATATCATGTTTCTTCATAGTTCCACTGGCCCCATTGTTGGAGCTTCTCCTTCTTCTCTGCCACTCACAGAACCCAATGGCTCTGTCGCCATCTCTTCAGAATCTCTCTGTTAACTCTGTTGCCAATGGGATTAGCAAAGACACCTCAAGAACCAGAAGAGGACCTTCCTTTCTGGTTCACATGGCGGCGTCCGATGCATCAATCGGTACTTATGAAGAAGGAAGTCTGGTGCGACCCATTTATACTGGACACACCCCTCTCTCTCGTCTCGTCGCAGCTCTTATTTCCTTCAAGCCTCTTTACTCTATCCTCAAGCTCGGCGCAAGGCAGGTCCTTATAAGCACAGCTGAGAAGAACAACATACCTTGGAGGGAAATGGCGAAAGAGATTTTAGAGTCAGATGTATATAAGGAGCTGGAAAGCATTCAAAACCATTCTCTAGTATACCCTGATTATTACTTGAATCCATTCCATGCCTATGATGAGGGCAATCTTACGTGGCTGGCAGCAGCTGAAGCAGAGGCTGCTACTTTGTCAATGGTGAGACGCGCAATCCCAGACGCTCCTTCGGTAGATGAAGCAAATCAGATACTTCGTGGCAACTGGCTTCAAGCAATTGAACAACATCATCTACAGTATTCAAAAACATCCATGATTAGTGACATTCTAGATATTGGATGCTCTGTCGGTGTAAGCACAAGACATTTTGCAGACAAGTTTCCCAATGCCAAAGTCACTGGGCTAGATCTGTCACCTTATTTTCTTGCTGTAGCTCAACGTAGGGAAAAGAAAAGAGCACAACCACGTAAACATTCCATAAGCTGGATACATGCAAATGGAGAAAACACAGGCTTGCCTTCGAAGTCTTTTGACATCGTTTCCATTGCTTTTGTGCTTCACGAATGTCCAAAAAGAGCTATAGTTAATTTAGTAAAGGAAGCATTTCGTCTTCTTCGACCTGGAGGCACCATAGCTTTGACAGATAATTCGCCAAAATCAAAGATTCTTCAGGAACTGTCACCAGTGCTGTGTACATTGATGAAGAGCACAGAACCGTTCCTTGATGAGTATTACTTGACTGATATGGAAGCTACTCTGAGCAAAGCTGGTTTTGTCAACATAAAATCCATTCTTACTGACCCAAGGCACATGACTACAACTGCAACGGTTCCACATTGA 1182 0.4408 MISCFFIVPLAPLLELLLLLCHSQNPMALSPSLQNLSVNSVANGISKDTSRTRRGPSFLVHMAASDASIGTYEEGSLVRPIYTGHTPLSRLVAALISFKPLYSILKLGARQVLISTAEKNNIPWREMAKEILESDVYKELESIQNHSLVYPDYYLNPFHAYDEGNLTWLAAAEAEAATLSMVRRAIPDAPSVDEANQILRGNWLQAIEQHHLQYSKTSMISDILDIGCSVGVSTRHFADKFPNAKVTGLDLSPYFLAVAQRREKKRAQPRKHSISWIHANGENTGLPSKSFDIVSIAFVLHECPKRAIVNLVKEAFRLLRPGGTIALTDNSPKSKILQELSPVLCTLMKSTEPFLDEYYLTDMEATLSKAGFVNIKSILTDPRHMTTTATVPH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0780 393 CDD AdoMet_MTases 222 328 - -
Lele30g0780 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 202 381 IPR029063 -
Lele30g0780 393 Pfam Methyltransferase domain 223 323 IPR041698 -
Lele30g0780 393 PANTHER METHYLTRANSFERASE 113 392 - -
Lele30g0780 393 Gene3D Vaccinia Virus protein VP39 212 390 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0780 Lele-ChrLele30 12142985 12145914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0780 223 334 Acyl Lipid Metabolism Gene Families AT3G18000 32.174 5.31e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0780 30 12142985 12145914 Lele31g0922 31 16620357 16626398 hybridization