Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0627 ATGGCTACCACCAATTCTTTCCTCTCCACTCCCTCCAAAACCCCATCCGACAAATCGGCTTCGTTGTCCAGGAAGCATGCCCCCTCAAACTCTCTTGAGTCTTCCGTTACTCGATCGTCCTCCAATTCCGATTTCAAGTCTCGATTCGAGGCCTACAATCGGCTTCAGGCTGCCGCCGTGGCCTTCGGTGAGAAGCTTCCAATTCCCGAGATCGTTGCACTTGGTGGTCAGTCTGATGGCAAGAGTTCTCTACTTGAAGCGCTCCTTGGGTTCCGATTCAATGTGCGCGAGGTTGAGATGGGTACTCGCCGGCCCCTCATTCTCCAAATGGTTCACGATCCCACTGCCCTGGAACCTCGATGCCGTTTTCAGGAGGAGGATTCAGAAGAGTATGGAAGCCCTGTCATTTCAGCATCTACTATTGCAGACATTATAAAGTCTCGAACAGACGCACTTTTGAAGAAAACAAAGACATCAGTATCTCCAAAACCGATTGTTATGAGGGCAGAATATGCTCATTGCCCAAACCTTACTATTATCGATACCCCCGGCTTTGTTCTTAAAGCAAAGAAGGGAGAACCGGAGAACACACCTGATGAAATTCTTTCAATGGTGAAAGAGTTGGCCAGTCCTCCCCATCGCATCCTCTTGTTCCTTCAGCAAAGCAGCGTGGAGTGGTGCTCATCCCTGTGGTTGGATGCGATTCGTGACATTGATCCAACATTTAGACGGACGGTGATTGTGGTCTCCAAATTTGATAATCGTCTCAAGGAATTCAGCGATCGATGGGAAGTGGATCGTTACTTAAGTGCAAGCGGTTACCTTGGAGATAGTACCCACCCTTTCTTTGTGGCCCTACCAAAAGATAGAGGAACTGTTTCAAATGATGAATTCCGCAGACAGATTTCTCAGGTAGACTCAGAGGTTCTGCGTCATTTGCGTGAAGGGGTCAAGGGAGGTTTTGATGAAGAAAAGTTTGGACACTATATTGGTTTTGGCTGTCTGAGAGATTATTTGGAGACTGAGCTTCAGAAGAAATATAAAGAAGCTGCACCAGCAACTCTGGCATTGCTTGAGCAGCGCTGCAGCGAAGTCACTTTAGGACTTGCTAGAATGGACTCGAAAATTCAGGCCACTTCAGATATTGCACATCTTAGGAAATCCGCTATGCTATATGCAGCTTCTATCAGCAATCATGTGGGTGCGTTGATTGATGGCGCAGCTGACCCTTCCCCTGAACAATGGGGGAAAACCACAGCAGAAGAGCAATCACAAAGTGGTATTGGGGTTTGGCCTGGGGTCATAGCAGATATAAAGCCTCCAAATGCTACACTTCGTCTCTATGGAGGAGCTGCTTTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCTCAGTGTCAAGGGAAAAGGTTGCGAATATATTACTTGCTCATGCTGGGCGAGGCGGGGGAAGAGGTGTAACAGAGGCTGCTGCGGAGATTGCCCGTGCTGCTGCTAAATCATGGCTTGCACCTCTTCTTGACACTGCTTGTGACAGGCTTGCTTTTGTTTTGGGAAGTTTATTTGATTTGGCTTTAGAAAGAAATCGCAGTCATGACTCAGAATACGGGAGTGAAAGAGGAAACATGGACGGTTATGTTGGTTTTCATGCTGCTCTAAGGCGTGCTTACAGTCGGTTCATAAGGGATCTAGCTAAGCAGTGCAAACAATTAGTTAGACACCACCTTGATTCAGTAACCAGTCCATACTCACAGGTCTGCTATGTTAATGACTTCCAACTATCTAATGGCCTAAATGCTACCTCTTTTAGGCAGGCTTCTGCTTCTTCATTTTTTCTTGAGTTGAGTGATACAGAGTCAGCTTCCCGCAAGATAACGAGGGATCGAGAAAATATACCCCCAGAAAAGAATGGACAGGAAACCACACCTGGTAAAACTGCAGAAGCTAAAGAAGCTTTGCGAGAAAGCCAGATGACTGTCCCTGAGACGCCATCTCCTGATCAGCCAGGTGATCCTGTCTATATTGGGGCTAAAAAGGATCTTGGAAATTGCAATGACTTTGGACCAAGAAAGAGAATTTCAAGAATGACAGGAAATGACAAAAATTCTGATAGTCTGAGATTGCAGAACGGTGACCTTCTATTGGGAAATGTGGATAAGTCAGGGTCAGCGTACTCAGAAATATGTTTATCAGCGGCACAGCATTTTGCACGTATACGTGAAGTGCTTGTTGAGAGAGGCGTGGCATCAACGTTAAATTCTGGATTTCTCACCCCATGTCGGGAACGGCTTATAGTGGCTCTTGGGTTAGATTTGTTTGCTGTGAATGATGAGAAATTCATGGACATGTTTGTAGCCCCTGGTGCTATAGATTTGCTGCAAAATGAACGAGAGTCTCTTCTGAAGCGTCAAAAAATACTCCAATCTTGCTTGAATGAATTCAAAAATGTTGCTCGGGCCCTTTGA 2484 0.4618 MATTNSFLSTPSKTPSDKSASLSRKHAPSNSLESSVTRSSSNSDFKSRFEAYNRLQAAAVAFGEKLPIPEIVALGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDPTALEPRCRFQEEDSEEYGSPVISASTIADIIKSRTDALLKKTKTSVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKELASPPHRILLFLQQSSVEWCSSLWLDAIRDIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDSTHPFFVALPKDRGTVSNDEFRRQISQVDSEVLRHLREGVKGGFDEEKFGHYIGFGCLRDYLETELQKKYKEAAPATLALLEQRCSEVTLGLARMDSKIQATSDIAHLRKSAMLYAASISNHVGALIDGAADPSPEQWGKTTAEEQSQSGIGVWPGVIADIKPPNATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGGGRGVTEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNRSHDSEYGSERGNMDGYVGFHAALRRAYSRFIRDLAKQCKQLVRHHLDSVTSPYSQVCYVNDFQLSNGLNATSFRQASASSFFLELSDTESASRKITRDRENIPPEKNGQETTPGKTAEAKEALRESQMTVPETPSPDQPGDPVYIGAKKDLGNCNDFGPRKRISRMTGNDKNSDSLRLQNGDLLLGNVDKSGSAYSEICLSAAQHFARIREVLVERGVASTLNSGFLTPCRERLIVALGLDLFAVNDEKFMDMFVAPGAIDLLQNERESLLKRQKILQSCLNEFKNVARAL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0627 827 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 65 352 IPR030381 GO:0005525
Lele30g0627 827 CDD DLP_1 66 352 IPR001401 GO:0003924|GO:0005525
Lele30g0627 827 MobiDBLite consensus disorder prediction 628 676 - -
Lele30g0627 827 Gene3D - 35 400 IPR027417 -
Lele30g0627 827 PANTHER DYNAMIN 50 821 IPR022812 -
Lele30g0627 827 PRINTS Dynamin signature 171 188 IPR022812 -
Lele30g0627 827 PRINTS Dynamin signature 240 256 IPR022812 -
Lele30g0627 827 PRINTS Dynamin signature 93 110 IPR022812 -
Lele30g0627 827 PRINTS Dynamin signature 68 86 IPR022812 -
Lele30g0627 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 359 IPR027417 -
Lele30g0627 827 SMART dynamin_3 45 281 IPR001401 GO:0003924|GO:0005525
Lele30g0627 827 FunFam Dynamin-related protein 5A 37 403 - -
Lele30g0627 827 Pfam Dynamin family 71 251 IPR045063 -
Lele30g0627 827 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0627 Lele-ChrLele30 10971498 10975574 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0627 30 10971498 10975574 Lele31g0765 31 15371660 15376268 hybridization
Lele30g0627 30 10971498 10975574 Lele32g0753 32 4875591 4886622 hybridization