Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0591 ATGGTGAACCCGTCAGTGCTCCGATCCTTACGCTCAACCGTTGCTCGTGGCTCCTCTCATCTCAGACAACGTGGGTATTCAACCGATGGAGTCCCTGAACGGAAGGTGGCCGTTCTCGGAGCCGCCCGCGGGATTGGTCAGCCCCTATCGTTGTTGATGAAGCTCAACCCCCTTGTCTCAAGTCTCTCACTTTACGATATCGCCGGAACCCCTGGTGTCGCGGCTGATGTCAGCCACATTAACAGTAGATCTGAGGTACACTTCCTTGTGTTTGTTCATCGATTTGTGGAATTTGCTAGAGTGGCCGGATACCAAGGTGAAGATGAGCTTGGGAAGGCTTTGGAAGGATCAGATGTTGTTATTATTCCCGCTGGTGTCCCCAGAAAGCCTGGAATGACACGTGATGATCTTTTTAATATTAATGCGGGCATCGTCAAATCACTCTGCACTGCTATTGCCAAGTACTGTCCTAATGTGGGTATCGTTTCTGAGTTAAAACCCATATGCTACAGGACTTACGATGAAAAGAAGTTGTTTGGGGTTACTACTCTTGATGTTGTGAGGGCAAAAACTTTCTATGCTGGGAAGGCAAAAGTTCCAGTTAAGCAGGTTATTGTGCCTGTTGTAGGTGGCCATGCAGGCATTACTATTCTCCCTCTATTTTCTCAAGCATCACCAAAAGCTAATCTAGGAAATGATGATATTATGGCTCTGACAAAACGAACACAAGATGGAGGAACAGAGAGAATTGTAGACAATTTAGGTTATCTTGTAAGCTATGCTGGAGCACTTTTCGCTGATGCTTGCCTCAAAGGACTTAATGGGGTCCCAGATGTAGTTGAATGCTCATTTGTGCAATCCAATGTCACTGAGCTGCCTTTCTTTGCTTCTAAGGTGAGGCTTGGGAAGAATGGTGTGGATGAAGTTCTGGGCTTAGGTCCTCTTTCAGATTATGAACAACAAGGCCTGGAGAGCCTTAAGTCTGAACTCAAAGCATCTATTGAGAAGGGAATCAACTTTGCCAACAAGAATTAG 1035 0.4609 MVNPSVLRSLRSTVARGSSHLRQRGYSTDGVPERKVAVLGAARGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINSRSEVHFLVFVHRFVEFARVAGYQGEDELGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNVGIVSELKPICYRTYDEKKLFGVTTLDVVRAKTFYAGKAKVPVKQVIVPVVGGHAGITILPLFSQASPKANLGNDDIMALTKRTQDGGTERIVDNLGYLVSYAGALFADACLKGLNGVPDVVECSFVQSNVTELPFFASKVRLGKNGVDEVLGLGPLSDYEQQGLESLKSELKASIEKGINFANKN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0591 344 Pfam lactate/malate dehydrogenase, NAD binding domain 35 161 IPR001236 GO:0016491
Lele30g0591 344 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 182 340 IPR022383 GO:0016616
Lele30g0591 344 FunFam Malate dehydrogenase 32 181 - -
Lele30g0591 344 CDD MDH_glyoxysomal_mitochondrial 35 341 IPR010097 GO:0006099|GO:0030060
Lele30g0591 344 FunFam Malate dehydrogenase 182 343 - -
Lele30g0591 344 Gene3D - 182 343 IPR015955 GO:0003824|GO:0016616
Lele30g0591 344 PIRSF Lac_mal_DH 31 344 IPR001557 GO:0016616|GO:0019752
Lele30g0591 344 SUPERFAMILY LDH C-terminal domain-like 181 342 IPR015955 GO:0003824|GO:0016616
Lele30g0591 344 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 35 342 IPR010097 GO:0006099|GO:0030060
Lele30g0591 344 ProSitePatterns Malate dehydrogenase active site signature. 181 193 IPR001252 GO:0006108|GO:0016615
Lele30g0591 344 PANTHER MALATE AND LACTATE DEHYDROGENASE 21 343 - -
Lele30g0591 344 Gene3D - 27 181 - -
Lele30g0591 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 163 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0591 Lele-ChrLele30 10633149 10635999 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0591 30 10633149 10635999 Lele31g0726 31 15026614 15029078 hybridization
Lele30g0591 30 10633149 10635999 Lele32g0787 32 5228609 5231432 hybridization