Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0583 ATGCCTCCCTTCCCCAAGTCCTTACACGGCCGTACACTTCCATTGTCGTCTAGTAGATCCGCACTCCTTCTCATCTCCTCCCTCTTGATTGCCATCTCAGGTTTTATTTTTGGTATTACCGCCTTTTTAAGGCAGATTCAGGGGTATAAATGCTTGAATGACCAGCCCCGATCGATTCGAGTAACTTGGGAACACGGCGGCGGAGGTGGTGACGTCGCCTGTTGTGTCAGCAATGGGATTGGTGTGCCTACAAGTAGGCATAAAGTTATGGGGTTTGTGGGTATTCAGACTGGGTTTGGATCTGCGGGTAGGCGTCAAGCATTGAGGAAGACTTGGATGCCTCCGGATCGGCAAGGGCTCCATCGTTTGGAGGAGGCTACTGGCTTAGCTTTCAGGTTTATCATTGGTAGAACAAATGACAAAACGAAGATGTCAGAACTACAGAGGGAAGTAGCAGAATATGATGATTTCATTCAATTGGACTTTGAAGAGGAGTACAGTAAGCTTCCATACAAAACTTTAGCTTTCTTCAAAGCTGCCTATGCACTTTTTGAAGCTGATTTTTATGTCAAAGCTGATGATGATATATATTTAAGGCCAGATCGTCTTTCTTTACTAATCGCAAAAGAGCGAAATCATCCTCAGACTTACATCGGATGCATGAAAAAGGGTCCTGTTATCAATGATCCAAAGCTCAAGTGGTATGAGCCTCTATCTTATTTGCTTGGATCTGAGTACTTTCTTCATTCCTATGGACCTATATATGCTCTTTCTGCTGATGTTGTTGCTAGCTTGGTTGCTTTAAAGAATGACAGTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCATGGATGCTTTCAATGAACGTGAAGCATGAAAATAATAAGGAGTTGTGTGCTTCAGGCTGTACTCCCACATTCATTTCTGTGCTAGATATTCCAAAGTGTTCAGGGCTGTGTGATCCAGAACAGAGAATGTTGGAACTCCATCAGAAGGAGAGCTGCTCAAAGAGCCCAACTTTGGTATCTGATGGTGAGTAG 1047 0.4394 MPPFPKSLHGRTLPLSSSRSALLLISSLLIAISGFIFGITAFLRQIQGYKCLNDQPRSIRVTWEHGGGGGDVACCVSNGIGVPTSRHKVMGFVGIQTGFGSAGRRQALRKTWMPPDRQGLHRLEEATGLAFRFIIGRTNDKTKMSELQREVAEYDDFIQLDFEEEYSKLPYKTLAFFKAAYALFEADFYVKADDDIYLRPDRLSLLIAKERNHPQTYIGCMKKGPVINDPKLKWYEPLSYLLGSEYFLHSYGPIYALSADVVASLVALKNDSFRMFSNEDVTIGAWMLSMNVKHENNKELCASGCTPTFISVLDIPKCSGLCDPEQRMLELHQKESCSKSPTLVSDGE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0583 348 FunFam Hexosyltransferase 88 319 - -
Lele30g0583 348 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 86 301 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele30g0583 348 Pfam Galactosyltransferase 104 297 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele30g0583 348 Gene3D - 75 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0583 Lele-ChrLele30 10600780 10604542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0583 6 348 Glycosyltransferase AT1G53290 66.667 9.82e-174 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0583 30 10600780 10604542 Lele31g0717 31 14980504 14983471 hybridization
Lele30g0583 30 10600780 10604542 Lele32g0795 32 5260350 5264169 hybridization