Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0545 ATGAGATGCAATGCATGCTGGAGAGAATTAGAAGGGCGTGCCATTTCCACAACATGTGGTCACCTTTTGTGCACAGATGATGCTAATAAAATATTAAGTAATGATGGAGTATGCCCAATCTGCGATCAAGTGCTTTCTAAGAGTCTCATGAAACCTATGGATATCAGTCCTAGTGATGAATGGATAAATATGGCCATGGCGGGAGTATCTCCACAGATATTGTTCAAGTCTTGTTACAGAAGTGTGATGTTCTACATTGGGCAAAAGGAACTGGAGATGCAGTATAAAATGAACAGGGTTGTAGCTCAATGCCGGCAGAAATGTGAGATGATACAACAGAAAGCCGAGATGATGCAAGAAAAGTTTACAGAAAAGCTAGAACAGGTCCATACTGCCTACCAAAAAATGACCAAGAGGTGTCAGATGATGGAACAGGAAATTGAGACCTTATCCAAGGACAAGCAAGAGCTCCAGGAAAAATTTGCTGAAAAATCCAGGCAGAAGAGAAAATTAGATGAAATGTATGATCAATTGAGGAATGAGTATGACTCAGTGAAACGATCTGCCATACAGCCTGCAAGCAACTTCTATTCCAGGAATGAGAATGATTTGTTCTCCAACCCACCTAATATAATGGATGAGAGAGAAACTGGCAGAAAAGGTTGGCCGGTGATCACTCCTGAAACTCCAGGGCCGAGAGAGGACGTATGGCCTGCAAGACAGAATAGCAACAACTCCGGTCACTTTGATATCTCCGTTGGTTCACCAGCAAAGCAAGCAGTTCTTGTGGGGGATACAGGGAATAGAAGGGTTGGAGGAAATCATCCTGTTTATGGGGCCGCTGCAACTAGTAACCCGTCAATGACTTTGAGGAACTTGATACTGTCTCCAATCAAACGGCCTCAGCTGTCTCGTAACCGCACCCAATTATTCACGCTGTAG 942 0.4363 MRCNACWRELEGRAISTTCGHLLCTDDANKILSNDGVCPICDQVLSKSLMKPMDISPSDEWINMAMAGVSPQILFKSCYRSVMFYIGQKELEMQYKMNRVVAQCRQKCEMIQQKAEMMQEKFTEKLEQVHTAYQKMTKRCQMMEQEIETLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEYDSVKRSAIQPASNFYSRNENDLFSNPPNIMDERETGRKGWPVITPETPGPREDVWPARQNSNNSGHFDISVGSPAKQAVLVGDTGNRRVGGNHPVYGAAATSNPSMTLRNLILSPIKRPQLSRNRTQLFTL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0545 313 MobiDBLite consensus disorder prediction 199 235 - -
Lele30g0545 313 FunFam E3 ubiquitin-protein ligase CCNB1IP1 homolog 1 53 - -
Lele30g0545 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Lele30g0545 313 Coils Coil 126 188 - -
Lele30g0545 313 Coils Coil 101 121 - -
Lele30g0545 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG 1 312 - -
Lele30g0545 313 Pfam zinc-RING finger domain 2 43 IPR001841 -
Lele30g0545 313 SUPERFAMILY RING/U-box 2 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0545 Lele-ChrLele30 10298022 10300582 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0545 30 10298022 10300582 Lele31g0678 31 14675659 14676628 hybridization
Lele30g0545 30 10298022 10300582 Lele32g0833 32 5540977 5543525 hybridization