Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0189 ATGAGTTCCCACGTCTCCTCCACCTTCTTCCTCTTCGAGTCTCCAAGGTGCTTTCTCTGTAATAATCTCTCTCGTCGTGGTGACTCTCTTCTCATTCCCGCTTCATCTTCCTCCAAACGGTGTCGGATTCTGTGCCAGAAGATGTCCTCCTCCTCTGAAACCTCCTTCCCTACCTTCACCGCTGTCAGCATATCTTTCTCGGAGCTCAAAGATAAGAACTCTGACTTGTCGATGAAGATTGAAGAAGGGTTTGGGCCCAATGGACTAGGAATTCTATCGGTCACAGATGTTCCTGGATATTCTTCATTACGTACTGATCTTTTGCATCTTGCACCCAGATTGGCTAGTCTCCCAGAAAAGGTGAAGGAGGAACTTGAGGATCCTCATAGTAGGTACAATTTTGGCTGGAGTCATGGGAAAGAGAAGCTTGAATCTGGGAAGCCTGATCTATTAAAAGGTTCTTTCTATGCAAATCCTATACTAGATAGGCCTACAACAGAGGCATCTTTGATACAACGGTATCCATCATACTGCGGATCAAATATATGGCCCAGCAATGCATTACCGGAACTTGAAGTGGCTTTCAAAGCACTTGGGAAGCTGATGTTTGATGTTGGGCTGATGTTGGCATATCACTGTGATCAATATGTATCTAAAGGGATGATAAAGCACCAGAATGAAGGTCTGGAGCCAGTACTTCTCCGCTCCCGTTGTCATAAAGGGCGTTTGCTTTATTATTTTCCTGCAAAACAAGGCATTCTGGATGGAAGCTCCATGTCTGATTGGTGTGGTTGGCACACCGACCATGGTTCACTAACAGGTCTGACCTGTGGTATGTTTAAGAGAAATGGTGCGGAAGTGCCTTGCCCTGATAGTACTGCTGGCTTATATATCCAAACACGAAGTGACCAAGTTGTGAAAGTTGTGTTTGGAAAAGATGATATAGCTTACCAAATTGGCGAAACCACTGAAATATTATCTAGAGGCTATCTTTGTGCAACACCTCACTGTGTTCAGGCTCCCAAGGGAGAGGAGGCTTCTGGTATTGAACGTTCAACATTTGCATTCTTCATGCAACCTGACTGGGATGAAAAACTCAATTTTCCTGAGGATGTTCATATTCATAAAGAGCTTATACCATCAAATGCTGCCCTTACTTTTGGAGAGTATTCAGAGATGCTGCTAGACAAATATTACCACCAAAAGAAGTAA 1212 0.4398 MSSHVSSTFFLFESPRCFLCNNLSRRGDSLLIPASSSSKRCRILCQKMSSSSETSFPTFTAVSISFSELKDKNSDLSMKIEEGFGPNGLGILSVTDVPGYSSLRTDLLHLAPRLASLPEKVKEELEDPHSRYNFGWSHGKEKLESGKPDLLKGSFYANPILDRPTTEASLIQRYPSYCGSNIWPSNALPELEVAFKALGKLMFDVGLMLAYHCDQYVSKGMIKHQNEGLEPVLLRSRCHKGRLLYYFPAKQGILDGSSMSDWCGWHTDHGSLTGLTCGMFKRNGAEVPCPDSTAGLYIQTRSDQVVKVVFGKDDIAYQIGETTEILSRGYLCATPHCVQAPKGEEASGIERSTFAFFMQPDWDEKLNFPEDVHIHKELIPSNAALTFGEYSEMLLDKYYHQKK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0189 403 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 360 IPR005123 -
Lele30g0189 403 PANTHER - 55 400 - -
Lele30g0189 403 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 186 IPR026992 -
Lele30g0189 403 Gene3D - 60 398 IPR027443 -
Lele30g0189 403 FunFam 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 59 398 - -
Lele30g0189 403 SUPERFAMILY Clavaminate synthase-like 73 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0189 Lele-ChrLele30 1894485 1902573 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0189 30 1894485 1902573 Lele31g0209 31 2057118 2058566 hybridization
Lele30g0189 30 1894485 1902573 Lele32g1202 32 12986300 12994504 hybridization