Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1364 ATGGCAAAAGCTGGTGCGTTGGATCTGGCGTCTGGTGTGGGAGGAAAGATTGAGAAAGCTGAAGTTCTGTCTGCTGTTGAAAAGTATGAGAAGTATCATGTTTCTTATGGAGGTGATGTGGAAGAGAGAAAGGCCAACTACACCGATATGGTTAATAAATATTACGATCTTGTTACCAGCTTTTATGAATTTGGCTGGGGGGAATCCTTCCACTTTGCAGACAGATGGAAAGGAGAATCTCTCCAAGAAAGCATCAAGCGACATGAGCACTTTCTTGCCTTACAACTTGGCTTGAAGCCTGGACAGAAGGTTTTGGATGTCGGATGTGGAATTGGGGGACCTTTGAGAGAAATTGCTCGATTCAGCATGACATCAGTTACAGGGTTGAACAACAATGAGTACCAAATAACCAGAGGAATGGAACTCAATCGCAGAGCTGGAGTATCGACTTGCAATTTTGTCAAGGCCGACTTCATGAAAATGCCATTCCCAGACAATTCTTTTGATGCAGTATATGCAATCGAAGCTACTTGCCATGCTCCGGACGCTCATGGATGTTATAAAGAGATCTATAGAGTGTTGAAGCCAGGCCAATACTTTGCTGCATTCGAGTGGTGCATGACTGATGCCTTCGATCCCAGTAACCAAGAACACCAAAAAATTAAGGCGGAAATAGAGCTCGGTGACGGGCTTCCCGACATTAGATTGACCTCAAAGTGTCTTGAAGCTCTAAAGCAAGCAGGGTTTGAGGTCATCTGGGAGAAAGATCTTGCGGTCGATTCTCCTATTCCTTGGTACTTGCCTTTAGATACAAGTCACTTATCACTGAGTAGTTTCCGTCTGACATCCGTTGGCCGACTTTTCACTAGAAACATGGTCAAGACACTGGAGTATATTGGACTAGCACCAAAGGGAAGTCTCAGGGTTCAACAATTTCTAGAAAAGGCTGCAGAGGGACTTGTTGAGGGTGGAAAGAGAGAGATTTTTACACCAATGTATTTCTTCCTGGCACGGAAGCCTCTTCCAGAGAATTGA 1035 0.4454 MAKAGALDLASGVGGKIEKAEVLSAVEKYEKYHVSYGGDVEERKANYTDMVNKYYDLVTSFYEFGWGESFHFADRWKGESLQESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREIARFSMTSVTGLNNNEYQITRGMELNRRAGVSTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAHGCYKEIYRVLKPGQYFAAFEWCMTDAFDPSNQEHQKIKAEIELGDGLPDIRLTSKCLEALKQAGFEVIWEKDLAVDSPIPWYLPLDTSHLSLSSFRLTSVGRLFTRNMVKTLEYIGLAPKGSLRVQQFLEKAAEGLVEGGKREIFTPMYFFLARKPLPEN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1364 344 Pfam Methyltransferase domain 105 201 IPR013216 GO:0008168
Lele29g1364 344 FunFam Methyltransferase 25 275 - -
Lele29g1364 344 PANTHER ZGC:194242 1 340 - -
Lele29g1364 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 341 IPR029063 -
Lele29g1364 344 CDD AdoMet_MTases 103 206 - -
Lele29g1364 344 Pfam Sterol methyltransferase C-terminal 277 340 IPR013705 GO:0006694|GO:0008168
Lele29g1364 344 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 54 340 IPR030384 GO:0008168
Lele29g1364 344 Gene3D Vaccinia Virus protein VP39 24 274 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1364 Lele-ChrLele29 20374235 20380475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g1364 89 256 Acyl Lipid Metabolism Gene Families AT1G48600 33.136 1.36e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1364 29 20374235 20380475 Lele31g0212 31 2091133 2096189 hybridization