Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1015 ATGGAGAGGAAGGTTCTGGCGGTTTGCGGTGTTGTGGGTTTCTTGGGGATATTAGCGGCTGCGACTGGGTTTGCTGCAGAGGGGACTCGGATTAAGGGTTCTCAAGTTATAACTGATCGTCCTGATCAATGCCTGTATCCTCGAAGTCCTGCACTACCTCTTGGTTTAACTGCAGCTCTGTCTCTTATGATCGCTCAAATCATCATAAATGTTTCAACTGGGTGTATTTGTTGTAGAAGAGGCCCTCGAATCCCTGATTCTAGTTGGAGGCTGGCACTGGTTTGCTTCGTATTATCTTGGTTCACCTTTGTCATTGGGTTTCTCCTGCTACTAACTGGTGCAGCGCTTAATGATCAACATGGTGGTGATGAAAGCATGTACTTCGGCACCTACTACTGCTATGTGGTGAAGCCCGGAGTTTTCACAGGTGGTTCGATCCTATCCCTTGCGAGTGCAGCATTTGGAATTGTCTACTACATTACCCTAAGCACAGGAAAGATCATTGGCGATGGTACATCGTCGTTGCCAAATCAAGGAGGAGGCATAGCCATGGGACAACCACAGTTCCCGCCAACCCAGACCAGTCAAGAACCAGTATTTGTACATGAAGACACATACATTAGAAGACAGTTCACTTGA 639 0.4726 MERKVLAVCGVVGFLGILAAATGFAAEGTRIKGSQVITDRPDQCLYPRSPALPLGLTAALSLMIAQIIINVSTGCICCRRGPRIPDSSWRLALVCFVLSWFTFVIGFLLLLTGAALNDQHGGDESMYFGTYYCYVVKPGVFTGGSILSLASAAFGIVYYITLSTGKIIGDGTSSLPNQGGGIAMGQPQFPPTQTSQEPVFVHEDTYIRRQFT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1015 212 Pfam Protein of unknown function (DUF1218) 58 152 IPR009606 -
Lele29g1015 212 PANTHER OS07G0462200 PROTEIN-RELATED 7 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1015 Lele-ChrLele29 7520370 7524094 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1015 29 7520370 7524094 Lele29g1015 29 7520370 7524094 ECH
Lele29g1015 29 7520370 7524094 Lele31g0517 31 13182368 13186025 hybridization
Lele29g1015 29 7520370 7524094 Lele32g0976 32 6717037 6720718 hybridization