Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0885 ATGGCCGTGACTCTCACGAAATTGAAGCTCTCACTTCTGTTGATCCTCTTCCTCGCATCGGCTCCAAGCTTCGCGAAAGTTCCTCCAACATGCAAGCGCATCGAGTGCCCTTCCTACGATGTGATTCATGTTGGCGACGGCTATGAAATCCGCCACTATAATTCCACTGTCTGGGCCTCAACCTCCCCCATTCAAGACATTTCTCTTGTCGAAGCAACCAGAACTGGATTCTTTAGGTTGTTTGATTATATTCAGGGGAAGAACAACTACAAGCAAAAAATTGAAATGACAGGACCTGTGATCACTGAAGTATCACCTAGTGATGGACCTTTCTGTGAGTCCTCATTTGTTGTAAGCTTCTTTGTTCCAAAGAAGAACCAAGCAAACCCTCCTCCAGCAAAGGGTCTCCATGTCCAAAGATGGAAGTCTGTGTATGCAGCAGTGAGGCAGTTCAGTGGGTTTGTGAGAGATTCAAATGTTGGGGAAGAAGCTGCTGCCTTGAAGGCCAGTATTGCAGCCACTGAGTGGTCTTCTGCCATTGAAAAGAGTCACAGAGGTGGACATGCTTCTGTTTATACCGTTGCTCAGTACAATGCCCCTTTTGAGTATGATGATAGGGCGAATGAGATTTGGTTCTTGTTTGATTTGGAGAATGGAAGGAATTCTAGCTGA 672 0.4598 MAVTLTKLKLSLLLILFLASAPSFAKVPPTCKRIECPSYDVIHVGDGYEIRHYNSTVWASTSPIQDISLVEATRTGFFRLFDYIQGKNNYKQKIEMTGPVITEVSPSDGPFCESSFVVSFFVPKKNQANPPPAKGLHVQRWKSVYAAVRQFSGFVRDSNVGEEAAALKASIAATEWSSAIEKSHRGGHASVYTVAQYNAPFEYDDRANEIWFLFDLENGRNSS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0885 223 SUPERFAMILY Probable bacterial effector-binding domain 27 214 IPR011256 -
Lele29g0885 223 Pfam SOUL heme-binding protein 34 212 IPR006917 -
Lele29g0885 223 Gene3D Regulatory factor, effector binding domain 33 222 IPR011256 -
Lele29g0885 223 FunFam Heme-binding protein 2 34 221 - -
Lele29g0885 223 PANTHER HEME-BINDING PROTEIN-RELATED 23 214 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0885 Lele-ChrLele29 6028304 6029907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0885 29 6028304 6029907 Lele31g0643 31 14447796 14449402 hybridization
Lele29g0885 29 6028304 6029907 Lele32g0867 32 5751495 5754852 hybridization