Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0822 ATGGCGAGTCGACCCTTAGAGAAGATGAAATCAATTGATGCACAGCTTCGTCAATTGTTTCCAGCCAAAGTGAGTGAAGATGATAAACTTGTGGAGTACGATGCTTTCCTCTTGGATAAATTCCTCCATATCCTCAACGATTTACATGGCCAACGTCTAACCCGAACGGTGCAAGAAGCGTACGAGCTATCAGCTGAGTACGAAGGAAAGCAGGAGGCACAGAAACTGGAGGAGCTGGGAAAATTGATAACAAGTTTGGACGCCGGCGACTCCATTGTGGTGGCCAAGTCATTTTCCAACATGCTTAATTTGGCCAACTTGGCGGAGGAGGTTCAGATAGCTCACCGGAGAAGAAACAAGCTCAAGAAGGGAAACTTCTCCGACGAGAACAACGCCACCACCGAATCTAACATCGAAGAGACCTTCCGGAAACTGGTCAAAGAAATGAACAAGTCGCCAGAAGAAATCTTTCAGGAACTCAAGAACCAGACGGTGGATCTCGTCCTCACTGCTCATCCAACTCAATCTGTTCGTAGATCTTTGCTTCAGAAATACGCTAGGATAAGGAATTGTTTAACTCAATTTTACGCCTCAAATAATTCTGATGAAAAGCAGGAGCTTGGTGAAGCCTTACTTAGGGAGATTCAAGCTGCATTTCGGACAGATGAAATAAGGAGGACACCACCAACACCACAAGATGAGATGAGAGCAGGAATGAGCTACTTTTATGAGACAATATGGATGGGAGTTCCTAATTTTCTTCGAAGAGTTGATACTGCTTTGAACAACATTGGCATTGACCAACGTGTTCCTTATGATGCTCCTCTCATTCAGTTCTCTTCTTGGATGGGTGGTGATCGTGATGGTAATCCCAGGGTCACTCCTGAAGTCACCAGGGATGTCTGCTTATTGGCCAGAATGATGGCCGCAAATCTCTATTACTCCCAAATCGAGGATCTCATGTTTGAGCTCTCAATGTGGCGCTGCAACGAGGAGTTGCGTGCTCGTGCGGATGAAATTCACGGATCTGCCAAGAAGGATGATGTTGCAAAACACTATAAAGAGTTCTGGAAAAGAGTTCCCCTAAATGAACCATATCGTGTAATACTGGGAAACGTAAGGGATAGACTTTACCATACTCGTGAGCGTTCTCGCCATCTGCTAGCTCAAGGTCACTCTGACATTCCAGAGGAATTGGCTTATACCACTGTTCAAGAGTTCATGCAACCTCTGGAACTCTGTTACAGATCACTGTGTGATTGTGGTGATAGAGCTATAGCAGATGGGAGTCTTCTTGATTTCTTGAGGCAAATCACCACCTTTGGACTGTCAATCGTGAGGCTTGATATCAGACAAGAATCTGATCGTCACAGCGATGTTATGGACGCCATTACAAAACACCTCGATGTCGGATCCTACCATGAATGGTCCGAAGAAAAAAGACAAGAATGGCTTCTCTCTGAGTTAAGTGGCAAGCGTCCATTGTTCGGACCAGACCTTCCTCAAACCGAAGAAGTTAAGGATGTTCTCGACACATTCCATGTCCTCGCAGAACTACCTCCCGGAAGCTTCGGCGCCTACGTCATATCGATGGCCACCGCGCCATCCGACGTCCTCGCCGTGGAGCTTCTTCAGAAAGAATGCCATGTGAAGTATCCACTAAGAGTTGTCCCGTTGTTTGAAAGGCTTGCAGATTTACAAGCAGCTCCGGCGGCTCTATCTCGCTTGTTCTCGTTAGACTGGTACAGAACCCGAATCAACAGGAAGCAAGAAGTCATGATCGGATACTCAGATTCAGGCAAAGATGCAGGAAGGTTCACGGCGGCGTGGCAGCTATATAAAGCTCAAGAAGAACTTATAAAGGTGGCGAAACAGTATGGTATCAAGCTGACTATGTTCCATGGCCGTGGCGGCACTGTCGGAAGAGGCGGCGGGCCAACGCATCTGGCTATATTGTCTCAGCCGCCGGACACGATTCATGGGTCGCTTCGAGTGACGGTGCAGGGAGAAGTCATAGAGCAATCGTTCGGAGAGCAGCATTTGTGCTTCAGAACGCTTCAGCGTTACACGGCGGCTACTTTAGAACATGGAATGCGTCCTCCGATTTCCCCTAAACCAGAATGGCGAGCTCTCATGGATGAAATGGCCGCCATTGCTACTGAGGAATACCGTTCTATTGTGTTCAAGGAATCACGTTTTGTTGAGTATTTTCGCCTGGCTACACCAGAACTGGAGTATGGAAGAATGAACATAGGAAGCAGGCCGGCGAAGAGAAAGCCAAGTGGGGGGATAGAATCACTGAGGGCAATACCATGGATATTTGCGTGGACGCAGACAAGGTTTCATCTGCCAGTGTGGCTAGGCTTTGGGGAAGCATTCAAGCAGGCAATAGGCAAAGACATACTGAATCTGAAGATGCTGCAAGACATGTATAATCAATGGCCTTTCTTCAGAGTGACCATTGATTTGGTTGAAATGGTGTTCGCCAAGGGAGACCCTGGCATTGCCGCTATCTATGATAAGCTTCTTGTTTCTCCTGAGCTCTTGCCTTTTGGTGACCAGTTGAGGGCCAAGTATGAAGAAACCAGGAAACTCCTCCTTCAGGTGGCTGGGCACAAGGAAATTCTAGAAGGGGATCCATACTTGAAGCAGAGACTGAGATTGAGAGATTCATACATAACAGCGCTAAATGTGTGCCAAGCATACACATTGAAGAGTGTGAGAGATCCAAACTACACAAAGAAGGAGCGTCCTAAGATCTCAGCGGATGATGAGGTGATGAGTAAAGCTGCTGACGAGCTGGTTGCACTTAATCCCACAAGTGAATTTGCTCCTGGTTTGGAAGATACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCATGCAAAACACTGGTTAA 2901 0.4712 MASRPLEKMKSIDAQLRQLFPAKVSEDDKLVEYDAFLLDKFLHILNDLHGQRLTRTVQEAYELSAEYEGKQEAQKLEELGKLITSLDAGDSIVVAKSFSNMLNLANLAEEVQIAHRRRNKLKKGNFSDENNATTESNIEETFRKLVKEMNKSPEEIFQELKNQTVDLVLTAHPTQSVRRSLLQKYARIRNCLTQFYASNNSDEKQELGEALLREIQAAFRTDEIRRTPPTPQDEMRAGMSYFYETIWMGVPNFLRRVDTALNNIGIDQRVPYDAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNEELRARADEIHGSAKKDDVAKHYKEFWKRVPLNEPYRVILGNVRDRLYHTRERSRHLLAQGHSDIPEELAYTTVQEFMQPLELCYRSLCDCGDRAIADGSLLDFLRQITTFGLSIVRLDIRQESDRHSDVMDAITKHLDVGSYHEWSEEKRQEWLLSELSGKRPLFGPDLPQTEEVKDVLDTFHVLAELPPGSFGAYVISMATAPSDVLAVELLQKECHVKYPLRVVPLFERLADLQAAPAALSRLFSLDWYRTRINRKQEVMIGYSDSGKDAGRFTAAWQLYKAQEELIKVAKQYGIKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRYTAATLEHGMRPPISPKPEWRALMDEMAAIATEEYRSIVFKESRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKQAIGKDILNLKMLQDMYNQWPFFRVTIDLVEMVFAKGDPGIAAIYDKLLVSPELLPFGDQLRAKYEETRKLLLQVAGHKEILEGDPYLKQRLRLRDSYITALNVCQAYTLKSVRDPNYTKKERPKISADDEVMSKAADELVALNPTSEFAPGLEDTLILTMKGIAAGMQNTG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0822 966 Coils Coil 104 124 - -
Lele29g0822 966 Pfam Phosphoenolpyruvate carboxylase 37 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Lele29g0822 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Lele29g0822 966 Gene3D Phosphoenolpyruvate/pyruvate domain 307 444 - -
Lele29g0822 966 FunFam Phosphoenolpyruvate carboxylase 1 307 444 - -
Lele29g0822 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 6 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Lele29g0822 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 219 235 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 279 294 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele29g0822 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0822 Lele-ChrLele29 5442844 5450128 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0822 29 5442844 5450128 Lele31g0709 31 14922270 14929839 hybridization
Lele29g0822 29 5442844 5450128 Lele32g0802 32 5308596 5316271 hybridization