Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0646 ATGAAAAATTGTCAGCTCCTAAACCCAATAACTCCACACAAGCGAACGTTGTTGTGCCTTGAAAACCCTTACGTAGTGGTAGCAGAGAAGAGGGAATATAGAATGTCTTCTATTGCTGCTTCAACGTTAGTTTCTGTTCCTCCTTCAACTAAACATGCGAATGAGTCCCACATCAGAAGACACTGCGCAAATTTTCATCCTTCTCTTTGGACCGATCATTTCCTTCAACAAGCCTCTCGCTCTTCTAAAGTTGATCATCGTGAAACTGTGCAACACATCGAAACTCTTAAAGAGGAAGTGAGGAAGATGCTTGCTCCTACCAATGAGAAGCCATCAATTTCAAAAGTTGTACTGATTGATTCAATTCAACGCCTCGGTTTGAGATATCATTTTGAAAGTGAAGTGGAACAAGTGTTGCAACAAACTCATAAGCACTACGTTCAAAATGGCCAATTAACTCTTGATGCAGACCTGTGCTTTGTTGCCTTGCTTTTCAGATTATTGAGACAAGATGGATATCTCATTTCACCTGATGTGTTTAACAAGTTCAAAGATGGAGAAGGAAAGTTCAGTGAAAGAGTTAGCAACGATGTGGAAGGAATGCTGAATTTATACGAAGCTGCTCATCTGAGTATTCATGGAGAAAACATCTTAGATGAAGCAATCGCTTTTACTTCCACTCAACTTCATCAAGCCATCCACGCTAACGCCATTGAACCAAACACATTTCTTGGTGAACAAGTTCATAATAGCTTGAGGCAATCTCTACATAGAGGATTGCCAAGGTTAGAGGCTCAAAAGTATATTTCAATCTACCACTTACATCCTTCTCAAAATGAAATCTTGCTAACAATAGCAAGATTAGATTTCAACGTCCTTCAAAATTTGCATCAGAAAGAAGTCGTGGACATTTGCAAGTGGTGGAACAACTTGGATGTGCCAAGGAATCTATCGTATGCAAGAGATAGGATTGTGGAATGTTACTTTTGGATTCTTGGAGTTTATTCTGAGCCTCAAAACTCTTTCGGCAGGCGGATACTCACCAAAGTGATAGCCATTTTATCCCTTATTGATGATACTTATGATGCTTATGGGACCATCGATGAACTCACCATTTTCACTCGTGCACTTGAGAGGTGGGATATTTGCTGCTTGGATGATCTCCCGGAATACATGAAGTTACCTTACGAGGCACTGTGGAATGTTTATGATGAAATGGATCAATACATGAGGAAAGAAGGAAGAGAATATTCTATGAACTACGCAATACCAGAAATGAAGAAGGTGGCGAGAGCGTTCATGAGAGAAGCCAAGTGGTTCAATGAAAACTACATACCCACAACACAGCAGTACCTTGACACAGCAACGATATCTTGTGGCTTTTCAATGCTCTCGACAATATCCTTCGTTGGGTTGGGACATATTGCCACTGAGGACATGTTCCAATGGGTCACAAGTCAGCCTAAGATTGTCAAAGCTTCTTCCCTGATTTGCAGAGCCATGGACGACATCGTTTCTAGTGAGTTTGAGCAGAAAAGAGGGCACGTTGTATCGGCGCTTGACTGCTATATGAAGGAACATGGAGTGTCAAGGCAAGAAGGCATTGAAGAGTTTCGTAAGGTTGCTAATAATGGGTGGAAGGATATGAACGAAGAATGCCTGAGACCTTTGAAAGTGGCGAGGCCATTTCTGATGCCAGCTCTGAACCTGGCTCGGGCCATGGACGTGCTTTACAAAGAAGAAGATAATTACACTCATGCTGCAGGCATCATGAAGAACTCCATTACAGCTTTATTGGTGGATCCTATGCCAATAATATGA 1821 0.4157 MKNCQLLNPITPHKRTLLCLENPYVVVAEKREYRMSSIAASTLVSVPPSTKHANESHIRRHCANFHPSLWTDHFLQQASRSSKVDHRETVQHIETLKEEVRKMLAPTNEKPSISKVVLIDSIQRLGLRYHFESEVEQVLQQTHKHYVQNGQLTLDADLCFVALLFRLLRQDGYLISPDVFNKFKDGEGKFSERVSNDVEGMLNLYEAAHLSIHGENILDEAIAFTSTQLHQAIHANAIEPNTFLGEQVHNSLRQSLHRGLPRLEAQKYISIYHLHPSQNEILLTIARLDFNVLQNLHQKEVVDICKWWNNLDVPRNLSYARDRIVECYFWILGVYSEPQNSFGRRILTKVIAILSLIDDTYDAYGTIDELTIFTRALERWDICCLDDLPEYMKLPYEALWNVYDEMDQYMRKEGREYSMNYAIPEMKKVARAFMREAKWFNENYIPTTQQYLDTATISCGFSMLSTISFVGLGHIATEDMFQWVTSQPKIVKASSLICRAMDDIVSSEFEQKRGHVVSALDCYMKEHGVSRQEGIEEFRKVANNGWKDMNEECLRPLKVARPFLMPALNLARAMDVLYKEEDNYTHAAGIMKNSITALLVDPMPII 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0646 606 SUPERFAMILY Terpenoid synthases 279 603 IPR008949 -
Lele29g0646 606 CDD Terpene_cyclase_plant_C1 60 602 IPR044814 GO:0010333|GO:0016102
Lele29g0646 606 SFLD Terpene Cyclase Like 1 C Terminal Domain 278 604 IPR034741 -
Lele29g0646 606 SFLD Isoprenoid Synthase Type I 278 604 - -
Lele29g0646 606 FunFam Isoprene synthase, chloroplastic 110 278 - -
Lele29g0646 606 FunFam Isoprene synthase, chloroplastic 242 593 - -
Lele29g0646 606 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 66 275 IPR008930 -
Lele29g0646 606 Gene3D - 110 278 IPR036965 GO:0010333|GO:0016829
Lele29g0646 606 PANTHER OS04G0344100 PROTEIN-RELATED 56 602 - -
Lele29g0646 606 Pfam Terpene synthase family, metal binding domain 283 548 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lele29g0646 606 Pfam Terpene synthase, N-terminal domain 70 252 IPR001906 GO:0010333|GO:0016829
Lele29g0646 606 Gene3D Farnesyl Diphosphate Synthase 67 593 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0646 Lele-ChrLele29 3992935 3997101 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0646 29 3992935 3997101 Lele31g0890 31 16345530 16348542 hybridization