Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0630 ATGGCCGGGACTAACGCCCCCTGTCTCTCCCACCTTCCCGATGAGATCCTAACCAACGTATTCGCCGACATATCCGACACTCGCACTCGCAACGCCCTCTCCCTCGTCTGCCGGAGCTTCCGCCGCCTCGAGAGGAGGACTCGCACCTCCCTCACGCTCCGCGGCAACGCGCGTGACCTTCATTTCATCCCTAACTGCTTCAGCTACGTCACCGACCTCGACCTCTCTCTCCTTTCTCCTTGGGGCCACGGCCTCTTCTCCATATCCTCTTACTCCGATCCTGGCCTCCTCGCCCACCGCCTTCACGACGCTTTCCCCGGCGTTACTTCGCTCACCGTCTACGTTCGCTCTGCCACCACGCTCCAGCTTCTGCTTCTCGTTCCCTGGCCAGAATTGCGCCACGTCAAGCTCGTCCGGTGGCATCAACGACCGGCGTCGGCGCCCGGGTCCGATTTCGCCGTATTGTTCGAGAAATGTAAATCACTGTGGTCTTTGGACCTATCCAGCTTCTACCACTGGACAGAGGATCTCCCTCCCGTTTTGACGGCTAATCCAGTTACGGCCGCCTCGGTAAAAAGGCTGAACCTATTGACGAAGTCGTTTTCTGAGGGATACAGGTCTCATGAAATCCAGTCGATCACTGCGGTTTGCCCTAACCTTGAGCACCTTCTGGTAGCTTGTAACTTCGATCCAAGGTACCTTGGGCATGTTGGAGATGAAGCTCTGTTGGCAATAGCTTCCAATTGCCCTAAGCTATCGCTTCTTCATCTTGCCGATACATCGTCGTTGGCTAACCGGAGGGGTGATCCTCTCGACGAGGGGTATACTGCCGAGGATGCTAGGATTAGCCGTTCAACACTAATTCAGTTGTTTTCTGGGCTTCCTTTGCTTGAAGAGCTGGTGCTAGATGTTTGTAAGAATGTGAGAGACAGTAGCTTTGCCTTGGAAGTGTTGAATTCCAAATGCCCCAAGTTGAAGGTCCTTAAGTTAGGCCAATTTCACGGGATTTGCTTGGCCATTGGGTCACAGCTCGATGGGATTGCCCTTTGCCAAGGACTTGAATCTTTGTCGATTAAGAATTGTGCAGACTTGACGGACATGGGTTTGATAGAGATTGCCAGAGGTTGCTCAAGATTGGTCGAGTTTGAAGTACAGGGATGCAAGCATATAACAGATAAAGGGCTGAAGACGATGGCTTGCCTACTTCGCAAGACTCTGATTGATGTTAAGATTTCTTGCTGCTTGAATCTTGACACCGCTGCATCTCTGAGAGCTTTGGAGCCAATTCGTGATCGGATCGAGCGGCTTCACGTGGATTGTGTGTGGAATGGCTTGAAAGAAACTGATGATAATCTGGGGAAAACCATCCTTGACTTCGACCTCAATGGGTTTGATGAACCGTGCTCTTCAACCACCGAGGCAGCTGAAGAGTTTGTGGATTACTTTGGGAGTAGTGCAGATTTAGAAACAAGCAAAAGGAAGAGGCAGAGAAGCGATTACTCGATGGGGGCCAATTGGAGCAACGGTAATGGTTATTGGTGCAACAGCTGGGACAGGTTAAAATCCCTTTCTCTTTGGATAGAAGTCGGGGAGCTACTGACTCCATTGCCAAGGGCAGGGCTGGAAGATTGCCCCAACCTGGAGGAGATTCGCATCAGGGTCGAAGGAGATTGCCGAGAGCGGCCAAAATTGACTGAGCGTGAATTTGGGCTGAGCATTCTTACATGTGATCGTTATCCTCAACTCACAAAGATGCAGTTAGATTGTGGGGAGACAACAGGTTATGCTCTCACGGCACCTTCAGGGCAGGTGGATTTGAGCCTGTGGGAGAGGTTCTTCCTCAATGGTATAGGCACTTTGACACTCGAGGAACTTGATTACTGGCCACCACAAGATGAAGATGTCAATCAAAGGAGCCTATCTCTTCCAGCTGCCGGCTTGCTCCGAGAATGTGACACCCTGAGGAAACTCTTCATTCACGGAACAACTCATGAGCATTTCATGAATTTCTTCCTTAAGATAAGCAACCTGAGGGATGTGCAACTGAGGGAGGATTATTACCCAGCACCAGAGAATGACATGAGTACAGAGATGAGGGTGGCTTCATGCAGCCGCTTTGAAGATGCTCTAAATAGGCGTCCAATTTATGATTGA 2154 0.5088 MAGTNAPCLSHLPDEILTNVFADISDTRTRNALSLVCRSFRRLERRTRTSLTLRGNARDLHFIPNCFSYVTDLDLSLLSPWGHGLFSISSYSDPGLLAHRLHDAFPGVTSLTVYVRSATTLQLLLLVPWPELRHVKLVRWHQRPASAPGSDFAVLFEKCKSLWSLDLSSFYHWTEDLPPVLTANPVTAASVKRLNLLTKSFSEGYRSHEIQSITAVCPNLEHLLVACNFDPRYLGHVGDEALLAIASNCPKLSLLHLADTSSLANRRGDPLDEGYTAEDARISRSTLIQLFSGLPLLEELVLDVCKNVRDSSFALEVLNSKCPKLKVLKLGQFHGICLAIGSQLDGIALCQGLESLSIKNCADLTDMGLIEIARGCSRLVEFEVQGCKHITDKGLKTMACLLRKTLIDVKISCCLNLDTAASLRALEPIRDRIERLHVDCVWNGLKETDDNLGKTILDFDLNGFDEPCSSTTEAAEEFVDYFGSSADLETSKRKRQRSDYSMGANWSNGNGYWCNSWDRLKSLSLWIEVGELLTPLPRAGLEDCPNLEEIRIRVEGDCRERPKLTEREFGLSILTCDRYPQLTKMQLDCGETTGYALTAPSGQVDLSLWERFFLNGIGTLTLEELDYWPPQDEDVNQRSLSLPAAGLLRECDTLRKLFIHGTTHEHFMNFFLKISNLRDVQLREDYYPAPENDMSTEMRVASCSRFEDALNRRPIYD 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0630 717 Gene3D Ribonuclease Inhibitor 7 456 IPR032675 -
Lele29g0630 717 SMART LRR_CC_2 376 401 IPR006553 -
Lele29g0630 717 SMART LRR_CC_2 350 375 IPR006553 -
Lele29g0630 717 SMART LRR_CC_2 217 248 IPR006553 -
Lele29g0630 717 PANTHER UNCHARACTERIZED 11 442 - -
Lele29g0630 717 ProSiteProfiles F-box domain profile. 6 53 IPR001810 GO:0005515
Lele29g0630 717 Pfam F-box 11 49 IPR041567 -
Lele29g0630 717 SUPERFAMILY F-box domain 5 44 IPR036047 GO:0005515
Lele29g0630 717 FunFam F-box/LRR-repeat protein 4 9 48 - -
Lele29g0630 717 SUPERFAMILY RNI-like 69 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0630 Lele-ChrLele29 3876074 3878227 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0630 29 3876074 3878227 Lele31g0912 31 16516996 16519149 hybridization
Lele29g0630 29 3876074 3878227 Lele32g0614 32 3815400 3817900 hybridization