Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0542 ATGTTTGTTTCAGAAGATGAAGAAGAAGGGATGAGAGCATTAGTATCTGCAGAATCAGAGTGGAGAAGGAAGATGAAGAGAGGAGAGACAGTGGAAGAGGTAGCAGGGTCGAGGTTGCCGGATTGCTCTCATGCGTGCGGCTCGTGTTCGCCGTGCAGACTTGTAATGGTCAGCTTCGTGTGTGCGTCCCTTCAGGAGGCTGAGACTTGTCCCATGGCTTACAAGTGCATGTGTCATGACAAGTCCTACCCTGTTGATGAGGATGAACCTTATTGGAGACAGAGAAAGGAAGATGAAGAATTGGAATGGTCACATAATTCTACTCACCTGATATCACATTTGGCTCAATGTCTTAGTAAGCAGATTTATCCCTTCTTTCTTCTATCCTCAGTTTTTTGCACACAGAGCACACTAGCTAATGCTATGGTTGGATCGCGATCATGGATAGGAGGATTCTTTCATCGCCCCAGCACTAAACGTCATCACAAGTTTGTTGACTATCCTCTGAGTCCTCTTCAGGAACAAAGGCTTCAAAGGCTTCAAGAACGGCTGCAAGTGCCTTTTGATGAGATTCGCCATGATCATCAAGAAGCTCTGAGAGCATTGTGGCAGTGTGCCTTTCCTGATATTGCTCTGAAGGGATTGATATCTAACCAATGGAAAGATATGGGATGGCAAGGTCCTAATCCATCAACTGACTTTAGGGGATGTGGCTTTATTTCACTTGAAAATCTGCTGTTTTTTGCAAGGACATACCCGTTATTTGGAGGTGGTAATGATATTTCTACTTTGCTTTTCCTTGCAGTGAAACCACGTTGTCTTCCAGGAATTAATTTTGTCAAATTATTAGAAGAAGATGAAGGGGCATTCGATATTCTATACTGTATAGCTTTTGAGATGATGGATGCTCAATGGCTGGCCATGCAAGCTTCCTACATGAACTTCAATGATGTTTTACAAGCAACGAGGATGCAATTGGAGAAAGAGTTGTGCTTGGAAGACCTACACAGAATGAAAGATCTTCCCTCTTACAATCTCTTGTACCATTGGCAATAG 1056 0.4337 MFVSEDEEEGMRALVSAESEWRRKMKRGETVEEVAGSRLPDCSHACGSCSPCRLVMVSFVCASLQEAETCPMAYKCMCHDKSYPVDEDEPYWRQRKEDEELEWSHNSTHLISHLAQCLSKQIYPFFLLSSVFCTQSTLANAMVGSRSWIGGFFHRPSTKRHHKFVDYPLSPLQEQRLQRLQERLQVPFDEIRHDHQEALRALWQCAFPDIALKGLISNQWKDMGWQGPNPSTDFRGCGFISLENLLFFARTYPLFGGGNDISTLLFLAVKPRCLPGINFVKLLEEDEGAFDILYCIAFEMMDAQWLAMQASYMNFNDVLQATRMQLEKELCLEDLHRMKDLPSYNLLYHWQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0542 351 Pfam ELMO/CED-12 family 278 319 IPR006816 -
Lele29g0542 351 Pfam ELMO/CED-12 family 179 253 IPR006816 -
Lele29g0542 351 ProSiteProfiles ELMO domain profile. 194 351 IPR006816 -
Lele29g0542 351 Pfam Epidermal patterning factor proteins 35 84 - -
Lele29g0542 351 PANTHER ENGULFMENT AND CELL MOTILITY 107 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0542 Lele-ChrLele29 3290731 3295095 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0542 29 3290731 3295095 Lele31g1003 31 17098473 17103127 hybridization
Lele29g0542 29 3290731 3295095 Lele32g0516 32 3248609 3250798 hybridization