Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0389 ATGCGATCAACCGTGCTTACTGGCCTGAACCATTCCGATACAGCGAGAGACAACGGAGGAGAAACCCGGAAAGGGATGGCGCTTGTGACCTCGCAAACCGTCAACGATGGGCCTTTGTTTGCGGAGGTTGATATGGGCTCCGATAACAACGCCGCTACTGTCCGAGCCACCGTCGTCCAGGCCTCTACCATCTTCTACGATACCCCCGCCACCTTAGATAAGGCTGAGAGGTTGTTTGCTGAAGCCGCGAGCCATGGCTCCCAATTGGTTGTGTTTCCAGAAGCATTTGTGGGTGGCTATCCCCGTGGTTCCAACTTCGGCGTTTGTATTGGAAATCGGACGGCTAAGGGTAAAGAGGAGTTCCGCAAGTATCATGCTGCAGCCATTGATGTCCCAGGTCCTGAAGTTGATAGATTGGCGGCAATGGCTGGGAAGTATAAGGCGTATTTGGTAATGGGTGTGATAGAGAGAGATGGCTACACATTGTATTGCACTGTTCTTTTCTTTGATTCTCAAGGTCGTTACCTTGGAAAGCATAGGAAAGTTATGCCAACCGCGCTGGAACGGATTATCTGGGGATTTGGGGATGGATCAACCATCCCAGTGTTTGAAACTCTCATTGGAAAAATAGGCGCTGCCATTTGCTGGGAGAACAAAATGCCTCTCTTGAGGACAGCCATGTATGCAAAAGGTGTTGAGATATATTGCGCACCTACGGCTGATGATATGGATGTGTGGCAAGCATCTATGACCCATATTGCTTTAGAAGGTGGATGCTTTGTTCTGTCGGCAAACCAGTTCTGTAGAAGGAGAGATTACCCGCCTCCTCCCGAGTATGTTTTCTTGGGCACAGAAGAGGACCTGACACCAGATTCTGTTGTATGTGCTGGGGGTAGTGTCATCATATCGCCCTCAGGGGCTGTTCTGGCAGGACCAAATTATGAGGGGGAGGCTCTGATCTCAGCAGATCTTGATATGGGAGAAATAGCGAGGGCAAAGTTTGATTTTGATGTGGTGGGACACTACTCGAGGCCTGAAGTGCTGAGCTTGAGGGTGAGGGACCATCCAACAAACCCAGTTATTTTCACATCATCATCCTCAAAAATTGAGGACCCTCCCAAATCATGA 1128 0.4965 MRSTVLTGLNHSDTARDNGGETRKGMALVTSQTVNDGPLFAEVDMGSDNNAATVRATVVQASTIFYDTPATLDKAERLFAEAASHGSQLVVFPEAFVGGYPRGSNFGVCIGNRTAKGKEEFRKYHAAAIDVPGPEVDRLAAMAGKYKAYLVMGVIERDGYTLYCTVLFFDSQGRYLGKHRKVMPTALERIIWGFGDGSTIPVFETLIGKIGAAICWENKMPLLRTAMYAKGVEIYCAPTADDMDVWQASMTHIALEGGCFVLSANQFCRRRDYPPPPEYVFLGTEEDLTPDSVVCAGGSVIISPSGAVLAGPNYEGEALISADLDMGEIARAKFDFDVVGHYSRPEVLSLRVRDHPTNPVIFTSSSSKIEDPPKS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0389 375 Gene3D - 42 338 IPR036526 -
Lele29g0389 375 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 54 326 IPR003010 GO:0006807
Lele29g0389 375 MobiDBLite consensus disorder prediction 1 23 - -
Lele29g0389 375 Pfam Carbon-nitrogen hydrolase 55 333 IPR003010 GO:0006807
Lele29g0389 375 PANTHER NITRILASE 38 368 IPR044149 GO:0003824
Lele29g0389 375 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 211 224 IPR000132 GO:0003824
Lele29g0389 375 SUPERFAMILY Carbon-nitrogen hydrolase 53 352 IPR036526 -
Lele29g0389 375 CDD nitrilases_CHs 54 354 IPR044149 GO:0003824
Lele29g0389 375 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 44 338 - -
Lele29g0389 375 MobiDBLite consensus disorder prediction 1 15 - -
Lele29g0389 375 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 86 101 IPR000132 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0389 Lele-ChrLele29 2341854 2344079 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0389 29 2341854 2344079 Lele31g1155 31 18137882 18140110 hybridization
Lele29g0389 29 2341854 2344079 Lele32g0369 32 2295792 2298055 hybridization