Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0379 ATGACTCGGATTTTGGTTCAGCGGGCTTCGTCTGGCAATTCTTCATCAAACCCAAGTCGTTCTTCTCTCTCCGGTTCTTCTTCAACTCGAGCAGAGCCACCCGCAACAGTGTCCCCGGCTCCTTCGCCTGTGAAAGATGAGGACAGTGGACAGGAGGTATCGGACCTAGCTGTTGACAACGAGATTTTGGATTATTCTCGGAGTAGTGACGGTAGGACAAAGAATGGCGATCATTTGGTAGAAAATCTTCATTTTGAGCAGAGAGACACTCCAAGTGATGAAATAGCTGACGTTGAGAAAGCTGTTAAGGAGGAGATAGCGGGTACGCGAGAATATGACAACAGATTGTGTGGATTGAAAATTTCACAAAGACTTGCATCAGGAAATGAGGGTTCAAGCAGTGATTCTATGCGCGGTGCTAACAGTACTACAAATCCACCACCTCCTCCGGTTCCTCCTCCAAAACCGTCAGCGACTAACTTGAATTCAAAGAAAAATGTGTCGTCAAATTCAAATGCTGTCCAAATAGGACCATCTCGAAGAGCATCTGCCTGGCCTGTTGTTTCAGCCAGGACTTCACCTGCTGGGTCTCGACCTACTTCCCCTAAGTCTCTTAATGAGAATGAAGGTTACAATAGTGCTGATGAGCAGAATCCATGCTTTCCATCCTCTTATGATGATTTAGAGAGAGAGCGGCAATTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAGAATGATGGAGGATGGAAACTGTCTTTTTCGTGCAGTTGCAGACCAGGTGTATGGGGACTCTGAATTATATGATTTGGTCCGACGGCTGTGCATAGACTATATGGAGCGAGAAAGAGACCACTTTTCTCAATTTATTACTGAAGGCTTCACATCTTATTGTAAGAGGAAGAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAATCCATGTGTGAGATGTATAATCGTCCCATTCATATACACTCTTATACTATAGAACCTATCAACATCTTTCATGGAAGTTATGACACTGACACACCACCCATACGACTGAGTTATCATCATGGGAATCATTACAATTCCCTTATTGACCCACGACGCCTGACAATTGGTGCAGGGCTTGGGTTTAGCTGCCTTCGTGGGACAAATGTTGACAAAGATCAAGTCAAGGCTGCAATTAAAGCTCAACAAGACCAACAGATTGATAATGCACTTTTAGCGGAGGGACGGTTCTACTCTGATCTTGAGCTTACAGAAAAGGAGATTGAGCACATGGTGATAGAAGCTTCTCGGGCTGAATATCTTGCTGATGTTACATTTAAGCAGCAGCGTGCCCATAGAGAATCCTCAACTTCAAATGCCGAGCCATCATCTTCTGGAGCAAGATCATCAGGTGCAGATGGCAAGACGGAGATGGGGAAAGAGCGAGATTCAAATCTGAGCAGTGGCATTCAGATGGTGCTATCCATGGGATTCAGCTACCTGCAGGCGATAGAGGCTTATAGCATATTTGGGGATGATGTGGATTCTATGGTTTGTTACCTCTTGGAAACCAGCAGTAGCAGCAGACGAAAAGGCAAGGCCACCGAATGA 1599 0.4472 MTRILVQRASSGNSSSNPSRSSLSGSSSTRAEPPATVSPAPSPVKDEDSGQEVSDLAVDNEILDYSRSSDGRTKNGDHLVENLHFEQRDTPSDEIADVEKAVKEEIAGTREYDNRLCGLKISQRLASGNEGSSSDSMRGANSTTNPPPPPVPPPKPSATNLNSKKNVSSNSNAVQIGPSRRASAWPVVSARTSPAGSRPTSPKSLNENEGYNSADEQNPCFPSSYDDLERERQFEIDIRRAKGYEVKRMMEDGNCLFRAVADQVYGDSELYDLVRRLCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQSMCEMYNRPIHIHSYTIEPINIFHGSYDTDTPPIRLSYHHGNHYNSLIDPRRLTIGAGLGFSCLRGTNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIEHMVIEASRAEYLADVTFKQQRAHRESSTSNAEPSSSGARSSGADGKTEMGKERDSNLSSGIQMVLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETSSSSRRKGKATE 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0379 532 MobiDBLite consensus disorder prediction 1 35 - -
Lele29g0379 532 PANTHER OTU DOMAIN CONTAINING PROTEIN 141 374 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 126 225 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 1 96 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 65 96 - -
Lele29g0379 532 ProSiteProfiles OTU domain profile. 244 367 IPR003323 -
Lele29g0379 532 Pfam OTU-like cysteine protease 252 361 IPR003323 -
Lele29g0379 532 MobiDBLite consensus disorder prediction 193 220 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 445 480 - -
Lele29g0379 532 Gene3D - 226 377 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 158 178 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 143 157 - -
Lele29g0379 532 MobiDBLite consensus disorder prediction 126 142 - -
Lele29g0379 532 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 477 520 IPR015940 -
Lele29g0379 532 SUPERFAMILY Cysteine proteinases 232 367 IPR038765 -
Lele29g0379 532 MobiDBLite consensus disorder prediction 447 467 - -
Lele29g0379 532 FunFam OTU domain-containing protein 5 225 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0379 Lele-ChrLele29 2300595 2305222 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0379 29 2300595 2305222 Lele31g1162 31 18180299 18185150 hybridization