Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0056 ATGGGAATCTCTACATCTTGGTTGCACTTGACCTGGATGCTGGTGCATATATTGATCTTTCAGTTCTCATTAAGAACTACTGCAATCAGGAAGGATATTGGGTTTCGAGTCGTACGTCAATGCAACACTACTGTTCAAGGGCGATACTTTCTTTCTGATGACAACGGGACTTATGCAAGTGTTTTTTACTACTGTGCTGGGAGATGCCGTCATAGTTCTGAGAGTGTGGTTCATGAAAATTCCTATCTTAATGACTTCCATCACTGTTTTCTTTTGCCATCAAATTCCTCCGCTGGAATAAATAGCATGCTCCCAGAGGCAAGATTGAATGGCATTAATGTTTTTGTTGGAAGCAAGCAGAAATATATGACTTGCAAGGGAGCTTGCTTAGCAAGTGTAGGAACAGATCAGCCTGCTGAATTCGTTCATGATGCTCCGAAGCATTTGGGCTGGAGGGGTTGGCGTGCAGTTTCAGCCATGGGTCTTGTAAACTACTACAGCTACATCGATCACAAAATTGCCCGTGCTGTCAGCTATGATGAATTATTTTTATCTTCTCTTCAGCGATAG 570 0.4263 MGISTSWLHLTWMLVHILIFQFSLRTTAIRKDIGFRVVRQCNTTVQGRYFLSDDNGTYASVFYYCAGRCRHSSESVVHENSYLNDFHHCFLLPSNSSAGINSMLPEARLNGINVFVGSKQKYMTCKGACLASVGTDQPAEFVHDAPKHLGWRGWRAVSAMGLVNYYSYIDHKIARAVSYDELFLSSLQR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0056 189 Pfam SREBP regulating gene protein 60 90 IPR019352 GO:2000640
Lele29g0056 189 PANTHER UNCHARACTERIZED 56 149 IPR019352 GO:2000640
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0056 Lele-ChrLele29 324068 328204 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0056 29 324068 328204 Lele31g1490 31 20221271 20225851 hybridization
Lele29g0056 29 324068 328204 Lele32g0059 32 342130 345750 hybridization