Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1292 ATGGCGGCCAACAAATTTGCGACCTTGCTTAGCAGAAACACCAACACTGTGGTTGTGACTCTGGTTTATGCAGTTCTAGAATGGGTGTTGATACTTCTTCTTCTCCTGAATTCTCTGTTCAGTTATGTAATCACAAAGTTTGCCAAATGGGTTGGGCTCAAGCCTCCGTGTCTGCTTTGTTCAAGGCTGGATCATGTTCTTGAGTCGCCGGAGAGTAATAAAGGCAAGGTTTTGCAGAGTGATGTTGTGTGTGAAACTCATGCGGCTGAGATTTCCAAGATGGGTTTCTGCTCAATCCATGGAAAAATGGCGGAGACTCAGAGCATGTGTGAGGATTGCTTGCTCTCCATTAGAGGCATGGCTTTCGTTTCGTGGTTCAGTGAGAAATCTGAGAGATGTTCTTGCTGTGATAAGAGCTTGAGAACTACTTTTACAAGCAAAGAGACTTTGATTGTGGAAGCTTCAGACGACGACGACGATGATGAAGATGAGGAAGAAGAAGGAGATAGAGAGTGTGACCATCAGATACTTTTTGATGTTGAGAGTTTTATACTCAGAGAAGTTGCGGAAGATCGTTCAAACAGTTCCGTTTCAAAGGATGCAGAGAAAGATCATGAGAAAGAAGAAGATGATCTTCTTATCATTACAGAGACGGATCCGATTAGTGAATCTCACAATCTTCTTCATCGTTTCTCTGAGACTGTTTGGGAAGATAGATCGTTTGATTGCATCAATTTGCATTTTGAAACCAATGCAGATGATAATGATCAGCGTGTAATTCCTGTGGAGTTAATAGACTCTTTTACCTCTGCAAATATTGAATCTTGTAAATCAGTAGAAGGTCTTGGGAAGAAGAAGGACCAAAAGATCGAAACTTTAGCCCCTGAGTCATCGATTGAAGAGGAATTAAGCATGGCTCGCTTGAAGAATCATATGGTTTTGGAAGAAGATGAAGAGTCAAAAAATGATGGGGATAATGTTGAATCAGCCATGGAAAAGCAAGAAGAAGATGATGAACAAGCATTTGAAGGCACCCAAGAAGATCAATCCTCATCATCAAGTGATGATGATGCTGAAGTTCAAAATGCATTTGATGAATTCATAGCTCAGAATAATATTTGCCAGTCTCATCAGTCTTTGTTCTGTGAAGACAACAACAAAGAAACAACCCCAGAAGAAGAAGCAGATGAATCACAAGATAATCTGCCTAAATCTGAAGAACCCTCATGTTCTTGTGAATGCATAGAAGAAGAAGTCCAATCCTTAACAAGTGACGATGATGCTGAAGTTCCTGATGCCTTTGATGAATTCATTTCTCAGAATAACCTTGGTGTAGTTGAAACTGGTGCCAATGATAATGAGGATGCTGACCCAAGTTTAGTTGAGGAAAATCATGAAGAACAAAGTCATAATAATCATTCACCAAAATCCTCTGAGGAAGATGAAGTAGAAGAAGAAGAAGAAGACAAACTTCCTGAAACTCCAAGTTCTGTAGATGCCCTGCATTACCTGAATGGGAAAATGTTGCTTTATGAGAAAACAGAAGACTCAGTGGATGGAAGCGAGATAGAAAAAGGCGATTCAGTATCGTCGACTGAACAGCTAAAAACAGCTCTGAAATCGGAGAGGAAGGCTTTAAGTGCTCTATACCATGAGCTAGAAGAAGAGAGAAGTGCCTCAGCAATTGCAGCAAACCAGACAATGGCTATGATCACAAGACTGCAAGAAGAAAAAGCAGCAATGCAGATGGAGGCATTGCAATATCAGAGAATGATGGAAGAACAATCAGAATATGATCAAGAAGCCTTGCAGCTCTTAAACGATCTCATGGTGAAAAGAGAGAAAGAGAAGAAAGAACTTGAGAAGGAGCTTGAAGAGTACAAGCAGAAGGTAATGGATTTTGAAGCCAAAGAGAAACTAAGACTCTTAAGAAGAATGAAAAATGGAAGTGACAGAAATAGAGAATCCTCTTCTTCTTCTGCTTCTTTGGGTGAAGACATTACTGAGGAGCAATCATTTGATCTGAACTTTGAACCAAGGGAAGAAGAAGAAGATAACGTTAACACAACAACAACTTCCATAGATAAAGTTTCAAGCTTGGAGGAGATTACAATGGACTGTGTGAAGCACATGAATGCTCTAGATGGTTCATTAGCAGAATTTGAGGAAGAGAAACTATCAATTCTAGATCAACTCAAAGCATTAGAGGAAAAGCTCATAACTTTGGGTGATAAAGAACAGCTTCTTGATGACTTGAATCAGAACTGCTTTTTTAGCAGTACCCCAGAAGAAGACATGTGCTGTAACAATAATGTATATTCAGATGATAAACAATGTCAATCTCCAAGAATGCCAATGGCTTCTCTGGCAAAGAGGCTGCTTCCGTTTTTAGATGCAGTGAATGATGATGATGAGACAGAAGAATCATATTCATGTGGATGGCAAGAGGAAAACTCAGGAAATCTCACTGATAATATAACTATGGCAAAAGTTTCCATGGAAGAAGAGGTTGATCATGTTTACGAGAAGCTTCAAGCTCTTGAAAATGACACTGAGTTTCTGAAGAACTGCATGGGATCTACAGAGCAAGGAGATGAGAAAGGAATGGATCTTCTTCAGGATATATTGCAGCATCTCCGTGATCTCAAGGCTGTGGAACTTAGGCTAAATCAGTTGGGTGATGATGATTCATTGAGGTGA 2700 0.3993 MAANKFATLLSRNTNTVVVTLVYAVLEWVLILLLLLNSLFSYVITKFAKWVGLKPPCLLCSRLDHVLESPESNKGKVLQSDVVCETHAAEISKMGFCSIHGKMAETQSMCEDCLLSIRGMAFVSWFSEKSERCSCCDKSLRTTFTSKETLIVEASDDDDDDEDEEEEGDRECDHQILFDVESFILREVAEDRSNSSVSKDAEKDHEKEEDDLLIITETDPISESHNLLHRFSETVWEDRSFDCINLHFETNADDNDQRVIPVELIDSFTSANIESCKSVEGLGKKKDQKIETLAPESSIEEELSMARLKNHMVLEEDEESKNDGDNVESAMEKQEEDDEQAFEGTQEDQSSSSSDDDAEVQNAFDEFIAQNNICQSHQSLFCEDNNKETTPEEEADESQDNLPKSEEPSCSCECIEEEVQSLTSDDDAEVPDAFDEFISQNNLGVVETGANDNEDADPSLVEENHEEQSHNNHSPKSSEEDEVEEEEEDKLPETPSSVDALHYLNGKMLLYEKTEDSVDGSEIEKGDSVSSTEQLKTALKSERKALSALYHELEEERSASAIAANQTMAMITRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNDLMVKREKEKKELEKELEEYKQKVMDFEAKEKLRLLRRMKNGSDRNRESSSSSASLGEDITEEQSFDLNFEPREEEEDNVNTTTTSIDKVSSLEEITMDCVKHMNALDGSLAEFEEEKLSILDQLKALEEKLITLGDKEQLLDDLNQNCFFSSTPEEDMCCNNNVYSDDKQCQSPRMPMASLAKRLLPFLDAVNDDDETEESYSCGWQEENSGNLTDNITMAKVSMEEEVDHVYEKLQALENDTEFLKNCMGSTEQGDEKGMDLLQDILQHLRDLKAVELRLNQLGDDDSLR 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1292 899 MobiDBLite consensus disorder prediction 313 329 - -
Lele28g1292 899 Coils Coil 564 591 - -
Lele28g1292 899 Coils Coil 718 755 - -
Lele28g1292 899 Coils Coil 830 850 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 151 171 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 313 358 - -
Lele28g1292 899 Coils Coil 603 637 - -
Lele28g1292 899 PANTHER MYOSIN-BINDING PROTEIN 2 1 890 IPR039306 GO:0017022
Lele28g1292 899 Coils Coil 536 556 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 153 170 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 419 433 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 330 358 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 653 669 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 462 479 - -
Lele28g1292 899 Pfam Zein-binding 534 624 IPR007656 -
Lele28g1292 899 MobiDBLite consensus disorder prediction 383 499 - -
Lele28g1292 899 MobiDBLite consensus disorder prediction 645 692 - -
Lele28g1292 899 ProSiteProfiles GTD-binding domain profile. 530 628 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1292 Lele-ChrLele28 8682869 8686145 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1295 25 8745988 8749234 Lele28g1292 28 8682869 8686145 hybridization
Lele26g1301 26 8647151 8650441 Lele28g1292 28 8682869 8686145 hybridization