Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0875 ATGCCGGAGTTGGGGTTTCAGGAGCGATCTTCGTCGAGGGCGGAACTCAGACCTCGCGATTGTAGCCCGGACTCTGTTATCTTTACTCTCGAATCTAACTTCAGTCTCTTCTCCTCTGCTTCTGCCAGTGTTGATCGCTGCTCCTTTGCATCTGACGTTCATGACCATGACTCTCTCGCCTCTGAAATCTCCCTGCAATTGGCAGTGCATGATGGTGATTTTTTTCCCACCGAGAATTGGAGCGGTCCAGATCCAAACAAACATGCAGCAAACAAGCACAGTCGCTCCTTGAGAGAGGAAGAAAAGGCAAAAGTTCAAAAGGAAGACAGCGATGCTGACGACGTTGAAGACGGTAATCAACTCTTGGAATTGGATTCTGCTAGAAACTCTTTCTCTCTGGCACTTAAAGAATGCCAAGATCGGAGATCAAGATCTGAAGCTTTATTGAAAAAGCCAGATCGGCGAAGGCCTGCTTCTTTAGATCTGAACAATGCAACCGGATCTTCGCCTCGACTGGGAACCATGAAGAAGAGTTCGGTATCAACTCGCAAGTCTAACAATTTTCCTAGTCCTGGAACACCGAATTATCGGCATGCTGGTGTGGTAATGCAGAAGGGTTGGAACTCTGAACGAGTTCCTTCGCATACAAGTGCTACCAGGAAGCAAGTCAGTGGGGCTCTGTTGCCTTTAAATAATGGAAGAATATTGCCATCAAAATGGGAAGATGCTGAGAGATGGATTTTCAGCCCTGTTTCGGGAGATGGCAGGGGCAGAAGTTCTCTTCCACCGCCCCAGAGGAGGCCAAAGTCAAAGAGTGGTCCGCTTGATCCCCCTGGAATTGCGTATCATTCGCTCTATTCATCGGCATTGCCCATGCTAGAAGGTGGAAATGCTGGAAATGTCATGGCAGGTTCTCCATTCATAGCCGGTGTTATCCGAGCCGATGGATTGACAATCCATTCCACCGGTCATGGTGGAGTACTTCCGACTCGAACAGATCCTGGCATGGCCCGCTCTGCTAGTGTGCATGGATGCTCTGACATGCAGAATCAGTCATCTTTTTCTTCCCAAGCGGAAAAGTTCGATGGTTCTAAATATGCGGCCACCAATGTAACTCGTGTTGTTTCGAGGAGGGACATGGCCACTCAGATGAGTCCAGAGGGTAGTCCATGCTCCTCTCCCAGTATGAGGGCTTCTTTCTCTGTCTCCCCCACACCTGGTCTGTCCATCATAGATTTCCCGAGTGCCTCTTCTAATATGGATATCAGAGATGTGCAGATAGATGAACGCGTCACCATGACAAGGTGGTCCAACAAACATAGAGCCCTATTCATCGGCAGAGGCTCGGAAACTGTTGACAACTGGAAAAAGAAAGAAAGAAGTGCCCAGCCTTCAGCTTGGGACGTTTCTGAAACTGCTAAGAGTGTTTCAAAAGTTAAGAGGGAGGAAGCTAGAATCTCTGAATGGGAGAACTTGCAGAATGCGAAAGCTGAGGCAGCGATAAGGAAACTAGAGCTGAAGTTGGAGAAGAAAAGATCATCTTCTATGGATAAGATTATGAGCAAGCTGAAATCGGCTCAAAAGAAAGCTCAGGAAATGAGAAGCTCAGTTTCCGACAACCAGGCCCATCACCATCAAGTTGGAAGAAATTTCCACAGGCCTCTATCTTTCCGTAGACCCAGCCAGATGGGTTCTTTGAGTGGATGTTTCACGTGCCACGCCTTTTGA 1728 0.4809 MPELGFQERSSSRAELRPRDCSPDSVIFTLESNFSLFSSASASVDRCSFASDVHDHDSLASEISLQLAVHDGDFFPTENWSGPDPNKHAANKHSRSLREEEKAKVQKEDSDADDVEDGNQLLELDSARNSFSLALKECQDRRSRSEALLKKPDRRRPASLDLNNATGSSPRLGTMKKSSVSTRKSNNFPSPGTPNYRHAGVVMQKGWNSERVPSHTSATRKQVSGALLPLNNGRILPSKWEDAERWIFSPVSGDGRGRSSLPPPQRRPKSKSGPLDPPGIAYHSLYSSALPMLEGGNAGNVMAGSPFIAGVIRADGLTIHSTGHGGVLPTRTDPGMARSASVHGCSDMQNQSSFSSQAEKFDGSKYAATNVTRVVSRRDMATQMSPEGSPCSSPSMRASFSVSPTPGLSIIDFPSASSNMDIRDVQIDERVTMTRWSNKHRALFIGRGSETVDNWKKKERSAQPSAWDVSETAKSVSKVKREEARISEWENLQNAKAEAAIRKLELKLEKKRSSSMDKIMSKLKSAQKKAQEMRSSVSDNQAHHHQVGRNFHRPLSFRRPSQMGSLSGCFTCHAF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0875 575 Pfam Remorin, C-terminal region 459 544 IPR005516 -
Lele28g0875 575 MobiDBLite consensus disorder prediction 142 158 - -
Lele28g0875 575 MobiDBLite consensus disorder prediction 142 197 - -
Lele28g0875 575 MobiDBLite consensus disorder prediction 249 278 - -
Lele28g0875 575 PANTHER OS02G0116800 PROTEIN 198 570 - -
Lele28g0875 575 Coils Coil 516 536 - -
Lele28g0875 575 MobiDBLite consensus disorder prediction 76 115 - -
Lele28g0875 575 MobiDBLite consensus disorder prediction 88 111 - -
Lele28g0875 575 Coils Coil 494 514 - -
Lele28g0875 575 MobiDBLite consensus disorder prediction 161 193 - -
Lele28g0875 575 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0875 Lele-ChrLele28 5649650 5652864 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0883 25 5653652 5656734 Lele28g0875 28 5649650 5652864 hybridization
Lele26g0894 26 5733604 5736804 Lele28g0875 28 5649650 5652864 hybridization