Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0874 ATGGCTTCCAAGCTACCATTTGAAGGCGATTACCTGTTGCTGAAGCCAGAAGAAGCGAGCGTGGTGGATCTCATTCGCCTCCTCTTTTCTTCTAAATTAAATGACAGAAAGTTCATCGATTGCCCGGCAGAGCTGCGTTACAAAGATTTTCGACGTCGATGGATCCTCTTCATCTCCGTCGTGCTTCAGAAGGCCCTTCTCACCTCCAAATGGTCCCTCAGCAAAATAGGCTCCCTGGTGGAGACGTGGCTCAACCTTGTTTCAATCAATGGCGGCTTCATAAGGCTTTCCTTCAACTTTCTCAGAGGAGCGGTAAGATTACCGGAGAGATCATCGGCGAAATTTACGTCGGTGGTCGGAAGCCTTGACTGGCGAATGAAATTAGACAAGAGTATTGGACGTGAGGATGCTAAGTACAACGGCATGCTGTCTATGATGGCCTCTAAGTTGTCCTACGAGAGTCAAAACCTCGTTGAAACTGCTGTCACAAGTTATTGGGATATGGATTTCTTGCGGTTCTACAGATTCCGGAACGAATACCAGGAAGCTGACTCCACACTAGCGATCATGTTCCAAGACACAAAGTCAGAACCCAACTTGATCGTAGTGGCATTTAGGGGCACAGTGCCCTTCGATGCAGACCAATGGATCACAGATGTGGACATATCATGGTACGAGATTCCCAAAGTGGGCAAAATCCATGGAGGCTTCATGAAGGCTTTAGGCCTCCAGAAGAACGGTGGGTGGCCCAAGGAGATAGACGAAGCCCCTGAGGCCCAACACAAGTTTGCATACTACACAATCAGAAGAGAGCTGAAACAGATTCTGCAGCAAAACGAGAGTGCCAAGCTTATAGTGACAGGACACAGCTTGGGAGGAGCTTTGGCCATTCTGTTTGCGGCCGTTCTAACACTTCACGACGAGGCATGGTTGCTTGATAAGTTAGAAGGCGTTTATACGTTTGGCCAGCCCAGGGTTGGGGACAAACAGTTCGGTGAATTCATGAAGGACAACTTGAAAAGGTACGATGTGAAGTATGTAAGGTATGTGTATGGCAACGACGTCGTGCCGAGAATCCCTTATGATGACAAGGCCCTCTTGTTTAAGCACTTCGTTCCTTGCGTCTTCTTCAACAGCTTGTATCAAGGGCAGGTTTTGGAGGAGGAGCCAAACAAGAACTACTTCTCGTTGTTGTGGGCCATACCCAAGAACATCAATGCAGCTTGGGAGCTGGTTAGGAGTTTTTTTATACCGTTCGTTGAAGGTGAGGAGTACAGAGAAAGTTGGTTAATGAGAATATTCAGGGTGATTGGATTGATAGTTCCAGGATTATCAGCTCATGTTATTCAGGATTATGTGAATCTTACTCGATTGGGTACCTTACCTGCATCTCCACAAGAATCCAGGGATGAGTGA 1416 0.4725 MASKLPFEGDYLLLKPEEASVVDLIRLLFSSKLNDRKFIDCPAELRYKDFRRRWILFISVVLQKALLTSKWSLSKIGSLVETWLNLVSINGGFIRLSFNFLRGAVRLPERSSAKFTSVVGSLDWRMKLDKSIGREDAKYNGMLSMMASKLSYESQNLVETAVTSYWDMDFLRFYRFRNEYQEADSTLAIMFQDTKSEPNLIVVAFRGTVPFDADQWITDVDISWYEIPKVGKIHGGFMKALGLQKNGGWPKEIDEAPEAQHKFAYYTIRRELKQILQQNESAKLIVTGHSLGGALAILFAAVLTLHDEAWLLDKLEGVYTFGQPRVGDKQFGEFMKDNLKRYDVKYVRYVYGNDVVPRIPYDDKALLFKHFVPCVFFNSLYQGQVLEEEPNKNYFSLLWAIPKNINAAWELVRSFFIPFVEGEEYRESWLMRIFRVIGLIVPGLSAHVIQDYVNLTRLGTLPASPQESRDE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0874 471 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 463 IPR044819 GO:0004806|GO:0006629
Lele28g0874 471 CDD Lipase_3 142 378 - -
Lele28g0874 471 Pfam Lipase (class 3) 202 363 IPR002921 GO:0006629
Lele28g0874 471 Gene3D alpha/beta hydrolase 129 406 IPR029058 -
Lele28g0874 471 SUPERFAMILY alpha/beta-Hydrolases 144 384 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0874 Lele-ChrLele28 5645073 5648163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0874 10 470 Acyl Lipid Metabolism Gene Families AT1G56630 51.992 1.56e-177 505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0881 25 5644692 5647842 Lele28g0874 28 5645073 5648163 hybridization
Lele26g0893 26 5728956 5733136 Lele28g0874 28 5645073 5648163 hybridization