Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0829 ATGGCGTCGTGTTTCGATCGATGGGAAAAAGATCCTTTCTTTACGGCGGCTGAAGAGGTTCAGGAATCTGCTGACAGGATGGAATCTACTTACCGGACATGGACGCACGCCAAAAACGATGCTTCCAGTAGGTGGGACTCTGAGGAACTCCGCCGAGATCTGCAAACTTCTCTCGGCACTGCAAAATGGCAGTTAGAGGAATTTGAACGGGCAGTTAGTGTAAGTTATGGCAAAAGTTCAAGCGATGAAGCACGGAATAGGCACCAAGATTTTATTGCTGCCATAAAGGGAAAAGTTAGAAAAGTTGAGCAGTCTTTGCAGGAATCCATTGTCTCAGATGGCAATGCACCTCTGCATTGCGTGCGTCTGAATGAAGGAGAACTGAATGAGCTTGCATTATTTCTTGTAGGAATGCCAGCTAATGAAGGCAAAACCCCTACTAAAAGTAAAGGTAGGGACAGTGAATGTAAACAATTAAGTGATAAAGATTCGGGTAGTATTTCAAAAAATCTAGTTTCATCTGAATGGAATCCCTTGGAAACAAGGAAAGAGAGTTCACATGGGCATCGTAGGATAGCTAGTGCTAGTGCCGATTTTAGTTCATGGCAGATTGCAATGTCTGGTGATGTCAAACCATATAGTTCTTCCAACGGAGCTTTTGGTCCTGTGCATAAGGTTCCCAGTTTTTCAGGATTTTTTAATTCCATGGAATCTGTTTCTAAGATCAATTGGCCTAAGAATACATGTAGAAAACTGAAAGCAGTGGATAATAATCGAGGAGCTGATAGTGCATTGCTGCCATCATCAGAATTGAACAGGGGCATCAATGTGTGCTATGAAAGAAGTAAGAGTTACCTTGATAGTTGTGATAAATGCTACGACAAGCAATTATATGGTTGGTATGGGGCTATACAAAGACAGCTTCAAAGGTCCCAGTACCTAATGCAATACAGTCGACCTGTTTTAATACTTTTCTGGATGGTTCTTTCCATTAGCTTGATTGTTTTAGTTGCATTCCGTGCAGTTTAG 1029 0.4198 MASCFDRWEKDPFFTAAEEVQESADRMESTYRTWTHAKNDASSRWDSEELRRDLQTSLGTAKWQLEEFERAVSVSYGKSSSDEARNRHQDFIAAIKGKVRKVEQSLQESIVSDGNAPLHCVRLNEGELNELALFLVGMPANEGKTPTKSKGRDSECKQLSDKDSGSISKNLVSSEWNPLETRKESSHGHRRIASASADFSSWQIAMSGDVKPYSSSNGAFGPVHKVPSFSGFFNSMESVSKINWPKNTCRKLKAVDNNRGADSALLPSSELNRGINVCYERSKSYLDSCDKCYDKQLYGWYGAIQRQLQRSQYLMQYSRPVLILFWMVLSISLIVLVAFRAV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0829 342 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Lele28g0829 342 MobiDBLite consensus disorder prediction 146 162 - -
Lele28g0829 342 MobiDBLite consensus disorder prediction 142 190 - -
Lele28g0829 342 FunFam Syntaxin 10 8 109 - -
Lele28g0829 342 Gene3D - 9 110 - -
Lele28g0829 342 PANTHER OS05G0443700 PROTEIN 1 334 - -
Lele28g0829 342 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Lele28g0829 342 MobiDBLite consensus disorder prediction 163 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0829 Lele-ChrLele28 5350345 5353219 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0832 25 5363809 5366293 Lele28g0829 28 5350345 5353219 hybridization
Lele26g0843 26 5436423 5437923 Lele28g0829 28 5350345 5353219 hybridization