Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0822 ATGTCTGGCAAGGGACCGGGGCTCTTCTCAGGCATAGGCCAGAAATCTAGAGATCTCCTCAACAAGGATTTTACCTCCGACCAAAGGATCACCATTAATTCCTCCAGCGGTAATGTTCTGGACTTGAACTCCACTTTGGTGAAGAAAGGACGACTGTCTTCTGGTGATCTGGCAGCAAAATTTAGGTGCAATAATAGCGCAGTTGATGTCACAGTTGATACTGAATCTAAGGTTTCGACGACAGTCACAATACCAGATATTGTGCATTCTACAAAAACCATAGCTTCAATCCAACTACCTGATTACAGCTTAAGCAAGTTGGAAGTTCAGTATCTTCATGATCACGTGGCTTTTACTACTGCTGTTGGTCTAAACGTGTCCCCTGCTATTGATTTTTCTGCAACAATTGGAACACCCAGCATTGCCTTTGGAGCAGAAATGAGCTTCTTGACTGCTACTGGAAAGTTTTCAAAGTACAATGCGGGGGTGAGCTTGACAAAGCCTGATTCCAACGCATCAGTAATTCTTGCTGACAAGGGAGACTCCTTGAGGGCATCATACTTGCAAAATCTTGATCATTTAAATGGGGGAGCTGTTGTGGGAGAGATTAGCCGAAGATTTTCTACAAATGAGAACACATTGACGGTCGGATGTTCCTATGTAATCAATGGTCAGACGTTTGTTAAAGCAAAGCTGAACAACCACGGCAATCTTACGGCACTTTTAAAGCATGAGGTTATTCCCAAGTCTTTCTTGACAATCTCTGGCGCCTTCCAAACCCAAGCTTTGGAGAGGAGTCCCAAGTTTGGTTTAGCACTGGCTCTCAAGCCTTAA 834 0.44 MSGKGPGLFSGIGQKSRDLLNKDFTSDQRITINSSSGNVLDLNSTLVKKGRLSSGDLAAKFRCNNSAVDVTVDTESKVSTTVTIPDIVHSTKTIASIQLPDYSLSKLEVQYLHDHVAFTTAVGLNVSPAIDFSATIGTPSIAFGAEMSFLTATGKFSKYNAGVSLTKPDSNASVILADKGDSLRASYLQNLDHLNGGAVVGEISRRFSTNENTLTVGCSYVINGQTFVKAKLNNHGNLTALLKHEVIPKSFLTISGAFQTQALERSPKFGLALALKP 277
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0822 277 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 277 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lele28g0822 277 FunFam Outer mitochondrial membrane protein porin 2 276 - -
Lele28g0822 277 CDD Porin3_VDAC 6 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lele28g0822 277 Pfam Eukaryotic porin 5 270 IPR027246 GO:0005741|GO:0055085
Lele28g0822 277 Gene3D Porin 2 276 IPR023614 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele28g0822 Lele-ChrLele28 5303212 5305070 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0825 25 5317925 5319816 Lele28g0822 28 5303212 5305070 hybridization
Lele26g0835 26 5393728 5395592 Lele28g0822 28 5303212 5305070 hybridization