Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0758 ATGGATAACACTATACTCCACTCCTTGCCTGCCTTGGACTCCTGCGGCAACAATTCCCCAAATCCTGCTAAGGAATTCGATTCCTTTTTAAGATTAATGTCTACATTTGATCACCCAAGTTATCGCCTAGAAGAATGCTTGCTGGAAGCTCTTATAGGATCCATGTTACTCCAATCCTCATCTAATATTAAGACTCAACGCTCAATATTGCCACCTCAGTGGAGCTCCTTTCATCTTTTAGAACCGATTGGCCTCTGGGTTTCTGCTGGAGCAATCCTCCGCTTCACTCATTTGCAGCTAGAAGAAAGAGCATCTGCTCATAGATCTCTCCTTGCTGCTTCAATGGCGGAGCCAACCAAGCACATGTCGCAGCAAGACCTCAGCAAACACAACAAGAGGGGAGATCTCTGGATCTCTATACAGGGCAAGATCTATGACGTCTCTCATTGGATTGATGACCACCCTGGCGGTGAGCTTCCATTGTTCAATCTGGCCGGCCAGGATGTTACAAACGCCTTTCTTGCTTTCCACCCGGGCTCCGCATGGCAATACCTCGACAAGTTCTTCACCGGGTATTATCTTCAAGACTACACCACATCAGAGGTGTCTAAGGATTATCGGAAACTTGTATACGAGTTCACCAAAATGGGTTTATTTGAAAAGAAAGGACACGGTGTGTTATTCTCATTGTTGTGCATGGCAATTTTGTTTTGTGTTTGTGTTTATGGTGTTCTGCGCTGTGATAGCCCATGGGTGCACGTGGGTTGCGGTGGGTTAATGGGGTTCTTGTGGATTCAGAGCGGGTGGCTTGGACATGACTCTGGGCACTATCAGGTAATGACGAGTCGGGAATTCAATGGATTCGCCCAGATCCTTACTGGGAATTGCCTTGCAGGCATCAGTATTGAATGGTGGAAGTGGAACCACAATGCTCATCACATTGCTTGTAACAGTCTCGAATTCGATCCTGATCTTCAGCATATGCCCTTTTTTGTGGTGTCTTCGAAGTTTTTCAACTCCCTTACATCTTACTTTTACGAGAGGAAGATGAATTTTGATTCCGTATCAAGATTCTTGGTTAGCTATCAGCATTGGACGTTTTATCCTGTAATGTGCTTTGCCAGAGTAAACTTATTCGCTCAATCGTTCATCTTATTGTTGTCAAAGAGGAAGGTGCCTAACAGATATCAGGAGCTTCTCGGTCTGCTTGTGTTCTGGATTTGGTATCCTCTTCTTGTTTCCTGTTTACCCAATTGGTTTGAAAGAATATTGTTTGTCATTGTTAGTTTTGCTGTCGTAGGAATACAACATGTTCAGTTCTGTTTGAATCATTTCTCTACCAGTGTCTATGTCGGCCAACCAAACGCCAATGATTGGTTTGAAAAGCAGACCAGTGGGACTCTTGATATAAAGTGCTCAGCTTGGATGGATTGGTTTCATGGTGGATTGCAATTTCAGGTGGCACACCATCTTTTTCCCAGGATGCCACGGTGCCATTTGAGGAAAATCTCGCCTTTGGTTAGAGAGCTATGCAAAACTCATAATTTGCCTTACAATTGTGTGTCATTCTGGAAAGCCAATGCACTTACAATTCAAACCCTCCGAGATGCAGCCTTGCAGGCTCGCAATATTTCTAATCCCATTCCCAAAAATCTAGTTTGGGAAGCTGTTAACACTCACGGATAA 1686 0.4425 MDNTILHSLPALDSCGNNSPNPAKEFDSFLRLMSTFDHPSYRLEECLLEALIGSMLLQSSSNIKTQRSILPPQWSSFHLLEPIGLWVSAGAILRFTHLQLEERASAHRSLLAASMAEPTKHMSQQDLSKHNKRGDLWISIQGKIYDVSHWIDDHPGGELPLFNLAGQDVTNAFLAFHPGSAWQYLDKFFTGYYLQDYTTSEVSKDYRKLVYEFTKMGLFEKKGHGVLFSLLCMAILFCVCVYGVLRCDSPWVHVGCGGLMGFLWIQSGWLGHDSGHYQVMTSREFNGFAQILTGNCLAGISIEWWKWNHNAHHIACNSLEFDPDLQHMPFFVVSSKFFNSLTSYFYERKMNFDSVSRFLVSYQHWTFYPVMCFARVNLFAQSFILLLSKRKVPNRYQELLGLLVFWIWYPLLVSCLPNWFERILFVIVSFAVVGIQHVQFCLNHFSTSVYVGQPNANDWFEKQTSGTLDIKCSAWMDWFHGGLQFQVAHHLFPRMPRCHLRKISPLVRELCKTHNLPYNCVSFWKANALTIQTLRDAALQARNISNPIPKNLVWEAVNTHG 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0758 561 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 117 196 IPR036400 -
Lele28g0758 561 Gene3D - 110 192 IPR036400 -
Lele28g0758 561 Pfam Cytochrome b5-like Heme/Steroid binding domain 124 193 IPR001199 -
Lele28g0758 561 SMART Cyt_b5_2 122 194 IPR001199 -
Lele28g0758 561 PANTHER FATTY ACID DESATURASE 2 119 542 IPR012171 GO:0016491
Lele28g0758 561 CDD Delta6-FADS-like 254 516 - -
Lele28g0758 561 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 119 194 IPR001199 -
Lele28g0758 561 Pfam Fatty acid desaturase 251 520 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0758 Lele-ChrLele28 4827964 4830939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0758 115 561 Lipid Metabolism Gene Families AT2G46210 63.697 0.0 643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0763 25 4843030 4844373 Lele28g0758 28 4827964 4830939 hybridization
Lele26g0770 26 4907941 4909284 Lele28g0758 28 4827964 4830939 hybridization