Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0756 ATGCAAGGGTTACGCCGCTGCTCAGAGGACGTTGTCCACCTCGACCTCACACCCTCCTCCACCACCGCCGCCTCCATGGCCAACTCCTCCTCCCTATCCATCGACGTCGACGAATCCGGCGAGGCCAGAATCCAACGCCTGATCTCCGAGCACCCCGTCATCATCTTCAGTCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTGCTAGCCACCATCGGCGTTCATCCCACCGTCATCGAACTCGATGACCACGAGATCGCCGCTCTCCCCACCTCCTCCGACCTCGACACCGAGTCCCTCCGCAACCGCGCCCCCGCCGTTTTCATCGGAGGCACCTCCATCGGTGGTTTGGAGTCCCTGGTGGCCCTCCATCTCAGCGGCCATCTCGTCCCCAAGCTAGTCGAAGTCGGTGCTCTCTGGAAATTAGGAAAAGCGTTTGTTGTTTATGGTTCTGTTGGGTATTCTGGGGCTTTTTGTGGGAAGGGATGGATGGTGCATAGGGAGTCAGTAGTCAATCTGGGGAAAGAATGGATTCGAATAAATGAGCGAGTATGGTTTTGCGTGAAAGATACTCGCTGGTTACGGAGGGAACACGTGTACAGGGTATCCAGTACGTGCAGTGCAGTGAGCTGGGAAACGTTGCTTGGGTTGTCCAACGTTTCGTTTCGCCGAGTCAGTCAGTGA 690 0.5667 MQGLRRCSEDVVHLDLTPSSTTAASMANSSSLSIDVDESGEARIQRLISEHPVIIFSRSSCCMCHVMKKLLATIGVHPTVIELDDHEIAALPTSSDLDTESLRNRAPAVFIGGTSIGGLESLVALHLSGHLVPKLVEVGALWKLGKAFVVYGSVGYSGAFCGKGWMVHRESVVNLGKEWIRINERVWFCVKDTRWLRREHVYRVSSTCSAVSWETLLGLSNVSFRRVSQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0756 229 CDD GRX_GRXh_1_2_like 52 134 - -
Lele28g0756 229 PRINTS Glutaredoxin signature 99 112 IPR014025 -
Lele28g0756 229 PRINTS Glutaredoxin signature 113 126 IPR014025 -
Lele28g0756 229 PRINTS Glutaredoxin signature 53 71 IPR014025 -
Lele28g0756 229 Pfam Glutaredoxin 53 116 IPR002109 -
Lele28g0756 229 PANTHER GLUTAREDOXIN 43 142 IPR011905 -
Lele28g0756 229 Gene3D Glutaredoxin 35 143 - -
Lele28g0756 229 ProSiteProfiles Glutaredoxin domain profile. 41 142 - -
Lele28g0756 229 TIGRFAM GlrX-like_plant: glutaredoxin-like family 44 142 IPR011905 -
Lele28g0756 229 SUPERFAMILY Thioredoxin-like 43 142 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0756 Lele-ChrLele28 4815279 4816118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0756 43 142 Miscellaneous Gene Families AT4G15690 43.000 4.71e-22 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0761 25 4825115 4825728 Lele28g0756 28 4815279 4816118 hybridization
Lele26g0768 26 4893203 4894046 Lele28g0756 28 4815279 4816118 hybridization