Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0718 ATGATAGCTTACCTGGAGCACTTCGTTCACGGAACTGACAAAGAATCAAGGCCCGACTACGACTTCGTCGGCCTCGCCGAAGCGCTTGACCTCCAAGGCAGCATCGACTGTGCACCCAACGGCATGGCCAGTAAAGATTTTGGAGGATTGCAGTACGTGAAGCCCTTGGCCCTCATCAGGCCCGCCGACGACGACGACATCGCTCGGGTCCTCAAAGCAGCGGCCCGGTCGTCGAATCTGACGATTGCCGCTCGAGGCAACGGCCACTCGATTAACGGCCAGGCTATGGCCGATCAAGGCATCGTCCTAGACATGCGCAGCATGGAGGAGAATTTTCGCCTGGTGTGGATTAATGGCTCAACCTACGTTGACCTCACGGCAGGGGCATTATGGGAAGACGTCCTGAAATGGTGCGTACGGGGGTTTGGGTTGGCCCCCAGGTCATGGACGGATTATCTGGGGTTAACGGTTGGAGGAACGCTTTCTAATGCCGGGGTAAGCGGTCAAGCCTTCCGTTACGGTCCTCAAACTTCGAACGTAACGGAATTGGAGGTTGTAACTGGCAAAGGCGATACGTTGATATGCTCCGAAACCGAAAATTCGGAGCTTTTCTTTGCGGCGTTGGGTGGTCTGGACTTCAGTAGGGATGCCGAGTCTCTGGTAACTCGTCAAGAAGACGACTCTTTCGATTACGTGGAAGGGTTCGTGTTTGTGAACAGCGACGACCCTGCGAACGGGTGGCCCATAGTACCATTGGATCCGGACCAAGAATTCGACCGGAACCACATCCCTCCCAGTGCCGGCCCCGTCCTTTACTGCCTCGAGCTCGCTCTTCACTATCGTGAATCAGACCACCCTTCGGACGTCGATGCGGTCGACGTGGGCTACACCGAGTTCTTGCTACGTGTTAAGCGTGCGGAGGAAGATGCTAAATCCAATGGCATCTGGGACGCCCCTCACCCTTGGCTCAACCTCTTTGTCTCCAGCCACAACATCGTTGACTTTGATCGCGCGGTGTTCAAGGGCATCCTCAGTAAAGGAGTAGGTGGGCCCATCTTGGTCTACCCACTCGTACGGAGCAAGTGGGATTCTCGAACGTCGGTGGCGTTGCCGGAGAGTGACATCTTCTACATTGTGGCGCTGCTCCGATTTAACCCGCCGCCCCCGAAAGGACCGGCCCCGGAGTCGCTGGTGGGTCAAAACCAAGAGATCATTCAGTTCTGCAGCAGCAGAGGTTTTGATTTCAAGCTATACCTCCCTCACTACAAGTGCCAGGAGGAATGGAAGCGACATTTCGGGAATCAATGGACCAGATTCGTGAGCAGAAAGACCAGTTTTGATCCCCTGTTTATCCTTGCACCTGGACAGAAAATATTCTCCAGAAACCCCCAATCCTAG 1398 0.5494 MIAYLEHFVHGTDKESRPDYDFVGLAEALDLQGSIDCAPNGMASKDFGGLQYVKPLALIRPADDDDIARVLKAAARSSNLTIAARGNGHSINGQAMADQGIVLDMRSMEENFRLVWINGSTYVDLTAGALWEDVLKWCVRGFGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELEVVTGKGDTLICSETENSELFFAALGGLDFSRDAESLVTRQEDDSFDYVEGFVFVNSDDPANGWPIVPLDPDQEFDRNHIPPSAGPVLYCLELALHYRESDHPSDVDAVDVGYTEFLLRVKRAEEDAKSNGIWDAPHPWLNLFVSSHNIVDFDRAVFKGILSKGVGGPILVYPLVRSKWDSRTSVALPESDIFYIVALLRFNPPPPKGPAPESLVGQNQEIIQFCSSRGFDFKLYLPHYKCQEEWKRHFGNQWTRFVSRKTSFDPLFILAPGQKIFSRNPQS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0718 465 Pfam FAD binding domain 55 195 IPR006094 GO:0050660
Lele28g0718 465 SUPERFAMILY FAD-linked oxidases, C-terminal domain 213 459 IPR016164 GO:0003824|GO:0050660
Lele28g0718 465 Gene3D - 10 115 IPR016167 -
Lele28g0718 465 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 212 459 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lele28g0718 465 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 211 IPR036318 GO:0050660
Lele28g0718 465 Gene3D - 213 418 IPR016170 -
Lele28g0718 465 PANTHER GULONOLACTONE OXIDASE 31 460 - -
Lele28g0718 465 Gene3D - 116 212 IPR016169 -
Lele28g0718 465 ProSiteProfiles PCMH-type FAD-binding domain profile. 51 224 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0718 Lele-ChrLele28 4595784 4599531 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0732 25 4615895 4620611 Lele28g0718 28 4595784 4599531 hybridization
Lele26g0739 26 4686385 4690131 Lele28g0718 28 4595784 4599531 hybridization