Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0520 ATGTTGAGATTGTGGAAATGGTACCAGAATTGCTTAGCTGTTCACCCAATTAAGACACAGATGATGAGCTCTGGTTTTATATGGGGGATTGGCGATATGGCCGCTCAGGCTATCACCCACTCCGCAGTTAAGAACCATGAACCAAACGAGGAGGACGATAAAGACTTTAAGGTCAACTGGAAACGGGTGACTACGATCACCTTCTACGGGCTTGGATTTGTTGGTCCTGTTGGCCACTACTGGTATGAAGGCTTGGACCGATATATAAGATTGAGACTGATGCTCAAACCAAATTCCTTTCGCTTTGTTGCCTCTAAAGTTGCTGTTGATACATATCTCTACGGGCCGTTGGATTTACTTGTATTTTTTACTTATATGGGTTTTTCCACAGGGAAGAGTATTGCTCAAGTCAAAGAAGATGTGAAGAGGGACTTTCTTCCGGCCTTGATTTTAGAGGGAGGCGTATGGCCATTTGTTCAAGTTGCAAATTTTCGTTTTATACCTGTCAGGTATCAGCTCCTTTATGCTAACTTGTTCAACACGTTGGATAGTAGTTTCTTGTCTTGGATTGAGCAACAAGAAGATGCTCCTTGGAAACAATGGATGAAACTCTGA 615 0.4276 MLRLWKWYQNCLAVHPIKTQMMSSGFIWGIGDMAAQAITHSAVKNHEPNEEDDKDFKVNWKRVTTITFYGLGFVGPVGHYWYEGLDRYIRLRLMLKPNSFRFVASKVAVDTYLYGPLDLLVFFTYMGFSTGKSIAQVKEDVKRDFLPALILEGGVWPFVQVANFRFIPVRYQLLYANLFNTLDSSFLSWIEQQEDAPWKQWMKL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0520 204 Pfam Mpv17 / PMP22 family 128 188 IPR007248 GO:0016020
Lele28g0520 204 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 4 190 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0520 Lele-ChrLele28 3308321 3309860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0520 7 194 Miscellaneous Gene Families AT2G14860 25.532 1.22e-18 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0509 25 3219422 3220940 Lele28g0520 28 3308321 3309860 hybridization
Lele26g0528 26 3346559 3348131 Lele28g0520 28 3308321 3309860 hybridization