Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0380 ATGTTGGGTGTCTCCTTCCTCTCGACTTTCCCATCTCTGCTCCCACTTGCTCGTGACTCGTCTCCCACCATCACCAGATGCTCCTCTCGTTCTGTACCTATTAGTTGTAATAAAATCGAAATTGATGTTAGTGGTGAAGATCAGCTCCATCGAAGAGACATTCTTAAATGCTTCGGGGCTACCATCGGCCTGGGACTGATAGAAAGCTCTCCATCTCTTGTTGGAGTCGCTAATGCTGCTGATTTGATACAACGAAGACAGCGTTCTGAATTTCTTTCTAGTATCAAAGGAACACTTTATACGGTCATCAAGGAAAATCCTGATATTATTCCATCCATACTAACATTGGCTTTGAATGATGCTATGACTTATGATAAGGCAACAAAAACAGGTGGCCCAAACGGATCGATACGGTTCAGATCTGATCCAGTATGCAGTGCTGTCAAGGCTACATTTTTAGCTTCTGCCATTCGCAAGTGTGGTGGAAATGAAGAGAAGGGGAGCTTGTTATACAATGCTTATGGATCAAACGGGCAGGTGTATATCCTTTTGATCTACTCTGCTTTCAAACTTTACAAGTGGGGCTTGTTCGATAAGCAATTTGGTAGGGCAGATGCTCAAGATCCGGATCCAGAGGGTAGAATTCCCCTGTGGGAGAAAGCAAGTGTCAAGGAAATGAAAGACAAGTTTTCTGCTGTAGGCTTTGGGCCTCGTCAGCTTGCTGTTATGTCTGCTTTCTTGGGTTCTGATCAGATGGCAACAGAGACCTTATTGGCCGCAGACCCAGATGTTGCTCCATGGGTCCAAAAATACCAACGGAGCCGAGAAACTGTGTCTCAAACAGACTATGAGGTTGATCTCATAACTACTCTCACAAAATTGAGCACCTTAGGCCAAAGTATAAATTATGAGGCATATACATATCCCGTCAAAAAGATCGATATCACCAAACTCAAATTGTAG 963 0.4382 MLGVSFLSTFPSLLPLARDSSPTITRCSSRSVPISCNKIEIDVSGEDQLHRRDILKCFGATIGLGLIESSPSLVGVANAADLIQRRQRSEFLSSIKGTLYTVIKENPDIIPSILTLALNDAMTYDKATKTGGPNGSIRFRSDPVCSAVKATFLASAIRKCGGNEEKGSLLYNAYGSNGQVYILLIYSAFKLYKWGLFDKQFGRADAQDPDPEGRIPLWEKASVKEMKDKFSAVGFGPRQLAVMSAFLGSDQMATETLLAADPDVAPWVQKYQRSRETVSQTDYEVDLITTLTKLSTLGQSINYEAYTYPVKKIDITKLKL 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0380 320 SUPERFAMILY Heme-dependent peroxidases 80 298 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele28g0380 320 CDD plant_peroxidase_like 93 317 - -
Lele28g0380 320 Pfam Peroxidase 98 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g0380 320 Gene3D - 216 285 - -
Lele28g0380 320 FunFam Thylakoid lumenal 29 kDa protein, chloroplastic 221 285 - -
Lele28g0380 320 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 52 309 IPR044831 GO:0004601|GO:0034599
Lele28g0380 320 Gene3D - 79 144 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele28g0380 Lele-ChrLele28 2320983 2324594 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0366 25 2236772 2245649 Lele28g0380 28 2320983 2324594 hybridization
Lele26g0383 26 2311311 2315128 Lele28g0380 28 2320983 2324594 hybridization