Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0289 ATGGTGGGGGGTGTACAGTCGGACTCGTCATCACTTCCCCTGTTCCCTTTCTCTACCTCCGCCATCTTCACGCTCAACTCTGAACTCTTCGCTATTCCCCTCAGGCCTGGCTGTCCTCCTGTTAGTCGTAGTTCATGGAGCTTCGAAAATTCTCCTCCTCCATTTAACACCTGGTATCCAGTCATCCTGAAGTCTGTGTTTTATATTCTTGCAACCCGTAGAATATTGAAAGCCGTGATGGAGAAAAAGAGATGGTCATGGAAGCGGAAATCTTCTGAGAAGAGCTCCGGCAGCTCTGAAGGATCAGGATCTGTGTCATCTCATTCTGAGAGATCCTCGGATGAGCAGGAGGCCTTGACGGAATCCCCTAATGGAAGCAATCAATCACCTGTTGTCACCTCAACAGCCGAAGCAGTTTATGAGGATGTTGACCGTAGTTTATCTATGGATGCACAAGCATCTGAAGTCGCCTCAAAAGCCATACCCGCTACAGATAATGTAAGTGATGGTTCGTTAGAAGACGATGGCAGTGATTTTAAAGACAATTTCAGAAATGCAAAGGAAGATGATGTCAATGATGGTCTAAAGAAGTTGTCAGAGAAGCTATCTGCAGCGCTTGTGAATGTCAGTGCCAAAGAAGATTTGGTTAAACAGCATGCCAAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAAATGAAGTGGCTGTTTTGAAAAAGCAACTGGAAGCAGCGGCTTTAAAGAATTCTGCACTGGAAGATCGAGTCACCCATTTGGATGGTGCCCTTAAAGAGTGTGTTAGACAGTTAAGGCAGACAAGAGAAGAACAGGAACAAAATATACATGATGCTGTGGTAGAGAAAACTCATGACTTGGAATCAGCTAAACTTCAACTTGAGAAACTCCAGAGTAAATTAGATGCTTCTAATGCCAGATCTGTTACAGTTGATCATGATCTGTGCCAAAAGGTTGAACATTTGGAGAAAGAGAACTTGAATCTCAAGCATGATCTTGTTGCTCAACTTGAAGAACTGAAAATCAGGACAATTGAGAGGGACTTGAGCACTAAAGCAGCTGAGACAGCTAGCAAACAACACTTGGAAAGCATCAAGAAAGTGGCCAAGCTTGAGGCTGAGTGCCGGAGATTGAAAAGCATGTCTTGTAGAAAATCCTCAGTTAATGATCATAAATCCATTGCTTCAGCCTCAATTTGTGTGGAATCTCTCTCAGATAGTCAATCCGACAGTGGGGAGAGGCTTAGTGCAGTGGAGAATATTGATTTCCATAAGATGAATGGCTTGGAGTTGAACAAGTCCGAGCCAAGCTGTTCTGACTCATGGGCATCTGCGCTAATTGCTGAGCTTGATCTGTTCAAGAATGAAAAGTGCCGGAAACCCTCATCCAGTTCAGTCAAAATTGATCTTATGGACGATTTTCTTGAAATGGAACGACTGGCTTCATTGTCTGAAACTAAGAATGAGAGTTCTTGCCAGGAACCAGTTGCTGCTAATCAGTGCCTTTTTGAAGAAGGCTCCCTCAGAGCGGAGCTTGAAAATATGAATCAGCAAATGTCTGAACTAATAGGGAAGTTGGAGAAGGCAGAAGCAGAGAAAGCAGATCTGGAGATAATTTTGATGAAAAGTGAAGACTGCATTGAGGCATCACAGCTTCAAGTGAGGGAAGCGGAGATGAAATTGGAGGAGATGCAAAGAGAGCTAGAAGCTGTTTACAAATCAAAGGAAACGATAGAAAATCAACTCATGAGCATGGAGGAAGAGGCACAGAAAATATTTGCTAAGGTTGACTCTCTAGAAGCCGAGGTTGATAGGGAGAGGGCTACGTCAGTTGAAATTGCTGTTAAGTGTAAAGAATTAGAAGAACTGGAAAGAAAGAAGCAAGAAGAGGACATTAAGAGTGCAGTTAGCTCATACAGCGAAAAAAAGATAAAGCAGGAGGACCTAGCATTGACTGCAGGAAAGCTTGCTGAATGCCAGAAAACAATCGTATCTTTGGGGAATCAGTTGAAATCTCTGGCAACACTAGAAGATTTCCTCATTGACACTGCTAGCATTCCAGAGTTCTCTGCAAGCCCATCACTCGTTGCTCCAGCTGGTGGAGAGACGTGGAAGCTGCATTCTAATGATACATTTTCACCGAAAAGAGAAACCAGTGCTTCGAAAGTAGCAGCAGAAAGGAGCTCTAGCCCATCATTGAACAAAAATGAAGGCTCGCCGCCACCTTCATCTCTATCAACTTCATCAGCCAGTTTACCAAATGCCAGTTCTGACAGAAGTCGAAATGGCTTCGCTAAATTTTTCTCTCGAACAAAAAGTGGAATTCGACTAGAAATTTAG 2361 0.4358 MVGGVQSDSSSLPLFPFSTSAIFTLNSELFAIPLRPGCPPVSRSSWSFENSPPPFNTWYPVILKSVFYILATRRILKAVMEKKRWSWKRKSSEKSSGSSEGSGSVSSHSERSSDEQEALTESPNGSNQSPVVTSTAEAVYEDVDRSLSMDAQASEVASKAIPATDNVSDGSLEDDGSDFKDNFRNAKEDDVNDGLKKLSEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKQLEAAALKNSALEDRVTHLDGALKECVRQLRQTREEQEQNIHDAVVEKTHDLESAKLQLEKLQSKLDASNARSVTVDHDLCQKVEHLEKENLNLKHDLVAQLEELKIRTIERDLSTKAAETASKQHLESIKKVAKLEAECRRLKSMSCRKSSVNDHKSIASASICVESLSDSQSDSGERLSAVENIDFHKMNGLELNKSEPSCSDSWASALIAELDLFKNEKCRKPSSSSVKIDLMDDFLEMERLASLSETKNESSCQEPVAANQCLFEEGSLRAELENMNQQMSELIGKLEKAEAEKADLEIILMKSEDCIEASQLQVREAEMKLEEMQRELEAVYKSKETIENQLMSMEEEAQKIFAKVDSLEAEVDRERATSVEIAVKCKELEELERKKQEEDIKSAVSSYSEKKIKQEDLALTAGKLAECQKTIVSLGNQLKSLATLEDFLIDTASIPEFSASPSLVAPAGGETWKLHSNDTFSPKRETSASKVAAERSSSPSLNKNEGSPPPSSLSTSSASLPNASSDRSRNGFAKFFSRTKSGIRLEI 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0289 786 Coils Coil 326 346 - -
Lele28g0289 786 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 80 781 - -
Lele28g0289 786 Coils Coil 230 257 - -
Lele28g0289 786 Pfam Filament-like plant protein, long coiled-coil 212 303 IPR008587 -
Lele28g0289 786 Pfam Filament-like plant protein, long coiled-coil 442 502 IPR008587 -
Lele28g0289 786 Pfam Filament-like plant protein, long coiled-coil 517 682 IPR008587 -
Lele28g0289 786 Pfam Filament-like plant protein, long coiled-coil 303 389 IPR008587 -
Lele28g0289 786 Coils Coil 512 616 - -
Lele28g0289 786 Coils Coil 269 314 - -
Lele28g0289 786 MobiDBLite consensus disorder prediction 713 770 - -
Lele28g0289 786 MobiDBLite consensus disorder prediction 154 178 - -
Lele28g0289 786 MobiDBLite consensus disorder prediction 118 133 - -
Lele28g0289 786 MobiDBLite consensus disorder prediction 89 133 - -
Lele28g0289 786 Coils Coil 620 640 - -
Lele28g0289 786 MobiDBLite consensus disorder prediction 720 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0289 Lele-ChrLele28 1708736 1714016 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0269 25 1586586 1589543 Lele28g0289 28 1708736 1714016 hybridization
Lele26g0281 26 1647004 1651796 Lele28g0289 28 1708736 1714016 hybridization