Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0232 ATGATAACAGCCGAAGATTTCTACCACGTCATGTGCGCAATGGTTCCCCTTTACTTCGCAATGCTCTTAGCCTATGCTTCTGTTAAATGGTGCAAGATATTAACCCCCGACCAATGTTCTGGCATCAACCGCTTCGTCGCTGTCTTCGCCGTCCCCGTCCTCTCCTTCCACTTCATCTCCGACAACAACCCCTACCAAATGGACTCCAAATTCATCATCGCCGACACCATCTCCAAGCTCATCGTCCTCCTCCTCCTTTCTCTCTGGGCCATCTTCTTCTCCGCCGGCAACCTGGACTGGCTCATCACCCTCTTCTCCCTCTCTACTTTGCCCAACACTCTCGTCATGGGCATCCCTTTGCTCCAAGCAATGTACGGCCCCTTCACCCAGTCCCTCATGGTTCAGCTCGTCGTGCTTCAATGCATCATATGGTACACTCTACTGCTGTTTTTGTTTGAATACAGAGCTGCAACCCTTTTGATCCACACCCACTTTCCTGGCCCTACGGCTGCTTCTATAACCCAGTTCGAGATCGACGGTGACGTCATATCCCTCGATGGGCGCGACGTGCCACTTCGAACCGAGTCCGAAACCGACAACCATGGGCGTATCCGTGTGCGGATTCGACGGTCCACGTCGTCGGCCCCTGATTCCGTACTATCTTCGTCGATAGGCCTCACGCCCAGACCCTCTAACCTGTCGAATGCGGATATATTTTCCGTCAACACGCCACTTCAGCTGCATGAGTTTCACGGTGCTGTTTGTGAGGCAACGGCGGCTGGAGTTGGTCATGATATCGTGTTTGGGCATGGCGATCTGGGATTCGGGTACCTGTCCACCAGCCCTCGTTTGTCCGGGTACGCGTCGTCGGACGCGTACTCGCTCCAACCGACTCCACGGCGGTCAAATTTTAACGAATTGGAGGCCACAACGACGGTGAGCACGCCGGTGTGGGCAAGGTCCCCGATCCTCGGTGGGAAGATATGCCGGCAGTCACCGACGGCATTTTCAGGGGCGAGGCTGGTGTGCGAGTCGCCGCCAGAAAAGTATCAGGACGGAGACAGACAAGGATGCAAAGTCATTACCGGATCGGCGTCAGAGAAGGAGATAAGCTTCAGGGATTGCACCAAAATGGGGACGGCGGACGAAGCGGGTGGGCCCAAAGAAGAGCAAGGAATGCCGGGGACTCTGGTGATGATGAGGCTAATACTGGTGGTGGTTGGGAGGAAACTCTCCCGAAACCCTAATACATATTCTAGTGCGCTTGGCCTTCTCTGGTCTCTCGTCTCCTTCAAATGGAACGTGGAGATGCCTAGTCTGGTGAAATCCTCCATCCAAATAATTTCGGATGCGGGCCTTGGGATGGCTATGTTCAGCTTAGGGCTGTTCATGGCGCTTCAGCCGAGGGTGATAGCGTGCGGCGCAAAAAGAGCGGCAATGGGAATGGGAATCCGCTTCATCGGAGGGCCGCTGGTAATGTCTGCCGCTTCCATCGCCGTCGGGTTGAGAGGACCCAAACTCCATACTGCTATCGTGCAGGCTGCTCTGCCTCAAGGCATCGTGCCATTTGTGTTTGCAAGAGAATATGGGGTCCACCCTGATATCTTGAGCACCGGGGTCATATTTGGAATGTTAGTTTCCTTGCCGGTAACGCTGTTCTATTACATCTTTCTCGGCCTCTGA 1683 0.5443 MITAEDFYHVMCAMVPLYFAMLLAYASVKWCKILTPDQCSGINRFVAVFAVPVLSFHFISDNNPYQMDSKFIIADTISKLIVLLLLSLWAIFFSAGNLDWLITLFSLSTLPNTLVMGIPLLQAMYGPFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIHTHFPGPTAASITQFEIDGDVISLDGRDVPLRTESETDNHGRIRVRIRRSTSSAPDSVLSSSIGLTPRPSNLSNADIFSVNTPLQLHEFHGAVCEATAAGVGHDIVFGHGDLGFGYLSTSPRLSGYASSDAYSLQPTPRRSNFNELEATTTVSTPVWARSPILGGKICRQSPTAFSGARLVCESPPEKYQDGDRQGCKVITGSASEKEISFRDCTKMGTADEAGGPKEEQGMPGTLVMMRLILVVVGRKLSRNPNTYSSALGLLWSLVSFKWNVEMPSLVKSSIQIISDAGLGMAMFSLGLFMALQPRVIACGAKRAAMGMGIRFIGGPLVMSAASIAVGLRGPKLHTAIVQAALPQGIVPFVFAREYGVHPDILSTGVIFGMLVSLPVTLFYYIFLGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0232 560 Pfam Membrane transport protein 9 555 IPR004776 GO:0016020|GO:0055085
Lele28g0232 560 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 559 - -
Lele28g0232 560 TIGRFAM 2a69: auxin efflux carrier 1 560 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0232 Lele-ChrLele28 1351709 1355142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0232 1 538 Organic Solute Cotransporters AT1G77110 66.489 0.0 713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0224 26 1292123 1295536 Lele28g0232 28 1351709 1355142 hybridization