Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0202 ATGGCTGTCCGGGTTACTTTTAGCTATTCTGGCTATGTCGCCCGGAGCTTGGTTTCGTCGGCCGTTACTCGAGTTTCCTGTACCCCTTGCTTCCTGGAATGCTGGATCCGGTCTCGCATATTTTGTCCTGGCCAACAGAAGCATGATGTCGATTCCTCCTCCCCTTGCGGCGTGCGTAGTTACCATTCCGATTACGGGCGGCCCAAATCCAATTGCTGCGTCCAGAATTTAGCACCTAAGTATACGACTCTCGCAGCGGGAATTCTGGGTGATAATTCTAAAAACCCGTTCGTTTCGGGTTTGATTTCGATGATGAGTTCAACTGTTGGTGTATCTGGTTCATGTGGCGTGGGTACTGTTGTTTGTGGTATTTCCCCGTGGAAAACCACTTCAATTATACCCTTTTTACAGGGGCTGAAGTGGCTTCCTTGTAACCAGTCAATTCCCTTTATCACAAGCTGCGTGGTGGATAAAGGCGGACCACACGGCTTTGGCGGGGAAGATTACCAGAAGTCGGGGTACAGTTCCAAGGAGATTGAGAAGACGGGCTGGCTTCCTCGTTTTTTACGACTCTGTTCAGAGGATGCGAAAGCTGTGTTTACTGCCGCTACTGTTAGTATTCTCTTCCAATCGTTCTTGGCTGAACCGAGATCGATTCCCTCGTCCTCAATGTACCCAACTCTGAATGTAGGTGACCGTATTTTGGCGGAGAAGGTTTCCTTCTTCTTTAGAAGGCCTGATGTTTCAGATATAGTAATTTTTAAGGCGCCTCCTATTTTGCAGGAAATCGGTTATAATTCAGGTGATGTGTTTATAAAAAGAATTGTGGCTAAGGCTGGGGACTGTGTTGAGGTTCTTGATGGAAAGTTACTGGTGAATGGTATTACTCAAGAAGAAGAGTTCATTTTGGAGCCACTCGCTTATGAGATGGACCGGCTGGTTGTGCCCGAAGGTTATGTCTTTGTGATGGGAGACAATCGCAATAACAGCTTTGATTCCCATAACTGGGGTCCGCTACCTGTCAAGAACGTTGTTGGTAGATCCATGTTTCGATACTGGCCTCCGTCCGAAGTATCCGAGACTTGCAAGCTGACTCCTGGGAATAATTCTGATGTTTTAAAGAATATTTCAGCAAGCGAGAACTGGAATTTGAAGGCTGTAAGAATTTCCCAGTTGGACGCTGGGGAGGTGAGGTTTGGCGCCTTCCGGACCTATGAATTCTCTGTCGAGTTGGGCAAGAGCCACTTTGGCTCTATCAATTTCTCGGACGACTTTGTTCCTTGGCGCAAATTTAGAAAACCCAAATCCGATTTATACTCTGTCATTCATGGAGCAACTTCCTGGGCAGTACTGGATACCTTGGAAATTGAAGGTCCACTTGAGTTACGAGTCGATCCTCCTCATCGACTCTCCCTCTCCTTGCCGCTGAATAACTCTCATGCTGGTTTGAAACGCGTCCTTGTTGGTGAGTGCATCACATTAAAAGGGGTAGTTATTAAAGGTCTTCCTTTCCGGGGTCGGTGCTTCCCTGAGCCAAAGAAGAATCGGGAAAATCTCAAGTTCCATTCGCAGGCAAACAAGTTTCTGATCAAGGATTGTGAAATGGGTGAAACCGAGCACCACCATCCCCCGCCGCCAGCACAGACGCCTCCGCCTGGACCACCGCCGCCTAATCTCGCACTTTCGAGGGGGCCCACTTGGACACCCGCCGAACAGCTCCTCCAGCTTCACTACTGCATCCATTCCAATCCTTCCTGGCCGGTGGCATGTCTACTGGGTTTTCAGCACTACATCGTGATGCTTGGAACTACCGTTCTGATTGCAAGCAACTTAGTGCCTCTGATGGGTGGGGGCCATGGTGACAAAGCTCGCGTGATTCAAACCTTGTTATTTATGTCCGGAGTGAACACTTTACTCCAGACATGGTTTGGTTCAAGGCTTCCAGTAGTAATGGGTTCTTCAATAGCCTTTTTTATCCCAGTGATGTCCATCATAAATGGTTACAGTGACCGTAATTTCTCATCTGAACATGAGAGGTTTACCTACACAATTAGGACAATTCAAGGCTCCCTGATTGTTTCTTCTTTCATCAACATCATCCTTGGGTTTAGTAGGGCATGGGGAAATTTAACAAGATTCTTTACCCCAATTGTCATTGTACCGGTGGTTTGTGTGGTTGGTCTTGGTTTGTTCATGAGGGGCTTCCCACTGCTTGCAAATTGTGTGGAGATTGGATTACCCATGCTCATTCTACTGGTCATAATCCAGCAGTATGTGAGGCGCATGATTCATCCTGCTGCACAGCATGTGGTTGAAAGGTTTGCTTTACTCGTGTGCATTGGCATAATCTGGGCTTTTGCTGCTATCCTCACTGTGGCTGGTGCATACAATAATTCTAAAGATCAGACCCAAAGAAGTTGCCGCACAGATCGCTCCTACCTCATGTCATCTGCTCCTTGGATTAAAGTTCCTTATCCATTTCAATGGGGTACCCCCATATTCAGCGCTAGTCACATCTTTGGGATGATGGGGGCAGCACTTGTCACTTCTGCAGAGTCAACTGGGACTTTCTTTGCGGCAGCTAGGCTTTCTGGTGCTACGCCCCCTCCTGCACATGTCCTCAGCCGAAGCATAGGGCTACAGGGTTTTGGGATGCTGCTTGAAGGCATATTTGGTTCTATTGTTGGTACTACTGCATCCGTGGAAAATGTCGGCCTACTCGGGCTGACACAAATAGGGAGCAGAAGAGTAGTACAGATATCATGTGGTTTTATGATCTTCTTCTCTATTTTTGGTAAATTTGGAGCCTTTTTTGCATCGATTCCTTTGCCGATATTTGCTGCTATTTACTGTGTTTTATTAGGAATTGTAGCTGCTGTTGGGATCTCATTTATGCAGTTTGCTAATAACAACTCCATGAGAAATCTCTATGTTCTGGGTTTATCTCTCTTTCTAGGGATATCAATTCCTCAATATTTTCTTGTCAACACAACTCCAGACGGTCGTGGTCCGGCTAGAACTAATGCCGGTTGGTTCAACGACATTTTGAACACGTTATTCTCTTCGCCTCCAACTGTGGCAATAATCGTCGGAACACTTCTCGACAACACACTCGACGCAAAGCGTACTGTTAACGACAGAGGAGTTCCATGGTGGGTGCCTTTCCAGGCCAAGAGGGGAGATGGAAGAAACGAAGAATTTTACAGCTATCCTCTGAGGATAAATGAATATATACCTTCCAGATTCCTTTGA 3252 0.468 MAVRVTFSYSGYVARSLVSSAVTRVSCTPCFLECWIRSRIFCPGQQKHDVDSSSPCGVRSYHSDYGRPKSNCCVQNLAPKYTTLAAGILGDNSKNPFVSGLISMMSSTVGVSGSCGVGTVVCGISPWKTTSIIPFLQGLKWLPCNQSIPFITSCVVDKGGPHGFGGEDYQKSGYSSKEIEKTGWLPRFLRLCSEDAKAVFTAATVSILFQSFLAEPRSIPSSSMYPTLNVGDRILAEKVSFFFRRPDVSDIVIFKAPPILQEIGYNSGDVFIKRIVAKAGDCVEVLDGKLLVNGITQEEEFILEPLAYEMDRLVVPEGYVFVMGDNRNNSFDSHNWGPLPVKNVVGRSMFRYWPPSEVSETCKLTPGNNSDVLKNISASENWNLKAVRISQLDAGEVRFGAFRTYEFSVELGKSHFGSINFSDDFVPWRKFRKPKSDLYSVIHGATSWAVLDTLEIEGPLELRVDPPHRLSLSLPLNNSHAGLKRVLVGECITLKGVVIKGLPFRGRCFPEPKKNRENLKFHSQANKFLIKDCEMGETEHHHPPPPAQTPPPGPPPPNLALSRGPTWTPAEQLLQLHYCIHSNPSWPVACLLGFQHYIVMLGTTVLIASNLVPLMGGGHGDKARVIQTLLFMSGVNTLLQTWFGSRLPVVMGSSIAFFIPVMSIINGYSDRNFSSEHERFTYTIRTIQGSLIVSSFINIILGFSRAWGNLTRFFTPIVIVPVVCVVGLGLFMRGFPLLANCVEIGLPMLILLVIIQQYVRRMIHPAAQHVVERFALLVCIGIIWAFAAILTVAGAYNNSKDQTQRSCRTDRSYLMSSAPWIKVPYPFQWGTPIFSASHIFGMMGAALVTSAESTGTFFAAARLSGATPPPAHVLSRSIGLQGFGMLLEGIFGSIVGTTASVENVGLLGLTQIGSRRVVQISCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLLGIVAAVGISFMQFANNNSMRNLYVLGLSLFLGISIPQYFLVNTTPDGRGPARTNAGWFNDILNTLFSSPPTVAIIVGTLLDNTLDAKRTVNDRGVPWWVPFQAKRGDGRNEEFYSYPLRINEYIPSRFL 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0202 1083 MobiDBLite consensus disorder prediction 543 562 - -
Lele28g0202 1083 MobiDBLite consensus disorder prediction 536 563 - -
Lele28g0202 1083 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 559 1079 - -
Lele28g0202 1083 Pfam Signal peptidase, peptidase S26 196 353 IPR019533 GO:0004252|GO:0006465
Lele28g0202 1083 SUPERFAMILY LexA/Signal peptidase 211 358 IPR036286 -
Lele28g0202 1083 ProSitePatterns Signal peptidases I signature 3. 320 333 IPR019758 GO:0004252|GO:0016020
Lele28g0202 1083 ProSitePatterns Signal peptidases I serine active site. 221 228 IPR019756 GO:0004252|GO:0016020
Lele28g0202 1083 CDD S26_SPase_I 215 347 IPR019533 GO:0004252|GO:0006465
Lele28g0202 1083 PRINTS Bacterial leader peptidase 1 (S26A) family signature 271 283 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele28g0202 1083 PRINTS Bacterial leader peptidase 1 (S26A) family signature 212 228 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele28g0202 1083 PRINTS Bacterial leader peptidase 1 (S26A) family signature 315 334 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele28g0202 1083 Gene3D Umud Fragment, subunit A 209 365 - -
Lele28g0202 1083 Pfam Permease family 590 993 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lele28g0202 1083 FunFam Peptidase/ serine-type peptidase 221 352 - -
Lele28g0202 1083 TIGRFAM sigpep_I_bact: signal peptidase I 198 354 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0202 Lele-ChrLele28 1175210 1186756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0202 569 1079 Organic Solute Cotransporters AT2G34190 59.491 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0197 26 1161699 1165450 Lele28g0202 28 1175210 1186756 hybridization