Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1819 ATGGAGAAAAAGAGATGGTCATGGAAGAGGAAATCTTTTGAGAAGAGCTCCAACAGCTCTGAAGGATCAGGATCTGTGTCATCCCATTCTGAGAGATCCTCGGATGAACAGGAGGCCCTGTCGGGATATCCTAATGGAAGCAATCAATCACCTGTTGTCACCTCAAAAGCAGAAGCTGGTTCTGAGGATGTTGACCGTAGTTTGTCTATGGATGCACAAGCTTCTGGAGTCGCCTCAAATGCTCTATCTGCTACAGACAATGTAACTGATGGTTCGTTAGAAGATGATGGCAGTGATTCTAAAGACAATTTCAGAAATGTAAAGGAAGATGATGTCAATGATGGTCTAAAGAAGTTGTCGGAGAAGCTATCTGCAGCGCTTGTGAATGTCAGTGCCAAAGAAGATTTGGTTAAACAGCATGCCAAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAACTGAAGTGGCTGTTTTGAAAAAGAAACTGGAAGCAGCGGCTTTAAAGAATTCTACACTGGAAGATAGAGTCACCCATTTTGATGGTGCCCTTAAAGAGTGTGTTAGACAGTTAAGGCAGACAAGAGAAGAACAGGAACAAAATATACATGATGCTGTGGTAGAGAAAACTCATGACTTGGAATCAGCTAAACTTCAACTTGAGAAACAGCTCCTTGAGCTCCAGAGTAAATTAGATGCTTCTAATGCCAGATCTGTTACAGTGGATCATGATCTGTGCCCGAAGGTTGAACATTTGGAGAAAGAGAACTTGAATCTCAAGCATGATCTTGTTGCTCAACTTGAAGAGCTGAAAATCAGGACAATTGAGAGGGACTTGAGCACTAAAGCAGCTGAGACAGCTAGCAAACAACACTTGGAAAGCATCAAGAAAGTGGCCAAGCTTGAGGCTGAGTGCCGGAGATTGAAAAGTATGTCTCGTAGAACATCCTCAGTTAATGATCATAAATCCATTGCTTCAACCTCAATTTGTGTGGAATCTCTCTCAGATAGTCAATCTGACAGTGGGGAGAGGCTTAATGCAGTGGAGAATATTGATTTCCATAAAATGAATGGCTTAGAATCGAACAAGTCTGAGCCAAGCTGTTCTGATTCATGGGCATCTGCGCTAATTGCTGAGCTTGATCAGTTCAAAAATGAAAAGTGCCGGAAACTCTCATCCAGTTCAATCAAAATTGATCTTATGGACGATTTTCTTGAAATGGAACGACTGGCTTCCTTGTCTGAAACTAAGAATGAGAGTTCTTGCCAGGAACCAGTTGCTGAAAATCAGTGCCTTTATGATGAAGGATCCCTCAGAGCGGAGCTTGAAAATATGAATCAGCAAATGTCTGAACTAATAGGGAAATTGGAGAAGGCAGAAGCAGAGAAAGCAGAGCTGGAGATAGCTTTGATGAAAAGTGACGACTGTATTGAGGCATCACAGCTTCAATTGAGGGAAGCGGAGATGAAATTGGAGAAGATGCAAAGTGAGCTAGAAGATGTTTACAAATCAAAGGAAACGATAGAAAATCAACTCATGAGCATGGAGGAAGAGGCACAGAAAATATTTGCTAAGGTTGACTCTTTAGAAACAGAGATTGATAGGGAGAGGGCTACGTCAGTTGAAATTGCTGTTAAGTGTAAAGAATTAGAAGAAGAACTGGAAAGGAAGAAGCAAGAAGAGAACCTCAGGTGTGCAGTTAACTCATACAACGAAAAAAAGATAAAGCAGGAGGACCTAGCATTAGCTGCAGGAAAGCTTGCTGAGTGCCAGAAAACAATCGCATCTTTGGGGAATCAGTTGAAATCTCTGGCAACACTGGAAGATTTCCTCATTGACACTGCTAGCATTCCAGAGTTCTCTGCAAGCCCATCCCTCGTTGCTCGAGCTGGTGAGGAGACGTGGAAGCTGCATTCTAATGATACATTTTCAATTAAAAGAGAAACCAGTTCTTCGAAAGTAGCAGAGGGGAGCTCTGGCCCATCAATGAACAAAAACGAAGGCTCGCCACCTTCATCTCTATCAACTTCATCAGCCAGTTTACCAAATGTTAGTTCTGAGAGAAGTCGAAATGGCTTTGCAAAATTTTTCTCTCGAACAAAAAGTGGAATTCGACTAGAAATTTAG 2133 0.4219 MEKKRWSWKRKSFEKSSNSSEGSGSVSSHSERSSDEQEALSGYPNGSNQSPVVTSKAEAGSEDVDRSLSMDAQASGVASNALSATDNVTDGSLEDDGSDSKDNFRNVKEDDVNDGLKKLSEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAETEVAVLKKKLEAAALKNSTLEDRVTHFDGALKECVRQLRQTREEQEQNIHDAVVEKTHDLESAKLQLEKQLLELQSKLDASNARSVTVDHDLCPKVEHLEKENLNLKHDLVAQLEELKIRTIERDLSTKAAETASKQHLESIKKVAKLEAECRRLKSMSRRTSSVNDHKSIASTSICVESLSDSQSDSGERLNAVENIDFHKMNGLESNKSEPSCSDSWASALIAELDQFKNEKCRKLSSSSIKIDLMDDFLEMERLASLSETKNESSCQEPVAENQCLYDEGSLRAELENMNQQMSELIGKLEKAEAEKAELEIALMKSDDCIEASQLQLREAEMKLEKMQSELEDVYKSKETIENQLMSMEEEAQKIFAKVDSLETEIDRERATSVEIAVKCKELEEELERKKQEENLRCAVNSYNEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPEFSASPSLVARAGEETWKLHSNDTFSIKRETSSSKVAEGSSGPSMNKNEGSPPSSLSTSSASLPNVSSERSRNGFAKFFSRTKSGIRLEI 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1819 710 Pfam Filament-like plant protein, long coiled-coil 133 238 IPR008587 -
Lele27g1819 710 Pfam Filament-like plant protein, long coiled-coil 367 428 IPR008587 -
Lele27g1819 710 Pfam Filament-like plant protein, long coiled-coil 247 316 IPR008587 -
Lele27g1819 710 Pfam Filament-like plant protein, long coiled-coil 437 608 IPR008587 -
Lele27g1819 710 Coils Coil 437 534 - -
Lele27g1819 710 Coils Coil 251 271 - -
Lele27g1819 710 MobiDBLite consensus disorder prediction 72 91 - -
Lele27g1819 710 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 705 - -
Lele27g1819 710 Coils Coil 190 210 - -
Lele27g1819 710 Coils Coil 158 178 - -
Lele27g1819 710 MobiDBLite consensus disorder prediction 37 56 - -
Lele27g1819 710 MobiDBLite consensus disorder prediction 1 115 - -
Lele27g1819 710 Coils Coil 212 239 - -
Lele27g1819 710 Coils Coil 542 566 - -
Lele27g1819 710 MobiDBLite consensus disorder prediction 648 690 - -
Lele27g1819 710 MobiDBLite consensus disorder prediction 1 16 - -
Lele27g1819 710 MobiDBLite consensus disorder prediction 94 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1819 Lele-ChrLele27 23133307 23136251 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0269 25 1586586 1589543 Lele27g1819 27 23133307 23136251 hybridization
Lele26g0281 26 1647004 1651796 Lele27g1819 27 23133307 23136251 hybridization