Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1718 ATGGTGGGGGTCTCCTTCCTCTCGACTTTCCCTTCTCTGCTCCCACTTTCTCGTGACTCGTCTCCCACCGTCACCAGATGCTCCTCTCGTTCTGTACCTATTACTTGTAATAAAATCAAAATTGATGTTAGTGGTGAAGATCGGCTCCATCGAAGAGACATTCTTAAATGCTTCGGGGCTACCATCGGCCTGGGACTAATAGAAAGCTCTCCATCCCTTGTTGGAGTCGCTAACGCTGCTGATTTGATACAACGAAGACAGCGTTCTGAATTTCTTTCTAATATCAAGGGAACACTTTATACGGTCATCAAGGGAAATCCTGATATTATTCCATCCATACTAACATTGGCTTTGAATGACGCTGTGACTTATGATAAGGCAACAAAAACAGGGGGCCCAAATGGATCGATCCGGTTCAGCCCAGAAATAAGTAGACCTGAAAATAAAGGACTTTCTGCAGCCTTGAATTTATTAGAGGAAGCCAAAAAGGAGATAGATTCATATTCCAAGGGCGGACCCATATCATTTGCAGATCTGATCCAGTACGCAGCGCAAAGTGCTGTCAAGGCTACATTTTTAGCTTCCGCCATTCGCAAGTGTGGTGGAAATGAAGAGAAGGGGAGCTTGTTATACAGTGCTTATGGATCAAACAGTCAGTGGGGCTTGTTCGATAGGCAATTTGGTAGGGCAGATGCTCAAGATCCGGATCCAGAGGGTAGAGTTCCTCTGTGGGAGAAAGCTAGTGTCCAGGAAATGAAAGACAAGTTTTCTGCTGTAGGCTTTGGACCTCGTCAGCTTGCTGTTATGTCTGTTTTCTTGGGTCCTGATCAGATGGCAACAGAGACCTTATTGGCCGCCGACCCAGATGTTGCTCCATGGGTCCAAAAATACCAACGGAGCCGAGAAACTGTCTCTCAGACAGACTATGAGGTCGATCTCATAACTACTCTCACAAAATTGAGCACCTTAGGCCAAAGTATTAACTATGAGGCATATACATATCCCGTCAAAAAGATCGATATTACCAAACTCAAATTGTAG 1041 0.4505 MVGVSFLSTFPSLLPLSRDSSPTVTRCSSRSVPITCNKIKIDVSGEDRLHRRDILKCFGATIGLGLIESSPSLVGVANAADLIQRRQRSEFLSNIKGTLYTVIKGNPDIIPSILTLALNDAVTYDKATKTGGPNGSIRFSPEISRPENKGLSAALNLLEEAKKEIDSYSKGGPISFADLIQYAAQSAVKATFLASAIRKCGGNEEKGSLLYSAYGSNSQWGLFDRQFGRADAQDPDPEGRVPLWEKASVQEMKDKFSAVGFGPRQLAVMSVFLGPDQMATETLLAADPDVAPWVQKYQRSRETVSQTDYEVDLITTLTKLSTLGQSINYEAYTYPVKKIDITKLKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1718 346 FunFam Thylakoid lumenal 29 kDa protein, chloroplastic 247 311 - -
Lele27g1718 346 Coils Coil 151 171 - -
Lele27g1718 346 SUPERFAMILY Heme-dependent peroxidases 80 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele27g1718 346 Pfam Peroxidase 99 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele27g1718 346 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 78 246 - -
Lele27g1718 346 Gene3D - 246 311 - -
Lele27g1718 346 PRINTS Plant ascorbate peroxidase signature 270 295 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1718 346 PRINTS Plant ascorbate peroxidase signature 142 166 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1718 346 PRINTS Plant ascorbate peroxidase signature 128 138 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1718 346 PRINTS Plant ascorbate peroxidase signature 110 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele27g1718 346 CDD plant_peroxidase_like 95 343 - -
Lele27g1718 346 Gene3D - 79 245 - -
Lele27g1718 346 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 52 335 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1718 Lele-ChrLele27 22487298 22490907 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0366 25 2236772 2245649 Lele27g1718 27 22487298 22490907 hybridization
Lele26g0383 26 2311311 2315128 Lele27g1718 27 22487298 22490907 hybridization