Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1521 ATGGATTGCAGAAACTCTTCTCTTCTCGGCGTGGCTCTCGCTCTTCTGGCTCTGTCATCGGCCGTTGAGGCCTTCGATATCACAAAGATGCTTGCACAATACCCAGAACTTAGTTCTTTCAGTCAATACCTTACCGAAACCAAGCTTGCCGATCAGATCAATAGTCGTCAAACCATCACCGTCCTCACCGTCGACAATTCCGGCATCTCTTCCATCTCCGGCAAGCCACAGGCCACCATCAAGTCCATCCTCAGCACTCATGTCATCCTCGACTACTTCGACGAGAAGAAGCTCATGTCCACCGTTCAGAGCTCACAAACTGAATTGACCACTCTCTACCAAACCACCGGTCCCACCAATCCGCAAATGGGCTTCATCAAGGTTGGGATGATCGGCGAGGGCGAGATAGCGTTTGGCTCCGCCGTCAAAGGCACCCCTATCGACGTCGAACTAGTCAGGACCGTCGTCACGCAGCCTTACAACATTTCTATCCTCCAAGTCGTTAGACCAATTATTGCCCCTGGCATTGATGGGCAATCGTCATCCCCATCAGCATCATCGCCGGCTTCATCATCGACACCAAAAGCACGGGCTCCATCATCGGCACCAAAACCAAAGGCTCCATCATCGCCATCAGCATCAGAGACACCAGCAGCAGCAAAGACTCCATCAGCATCATCGCCATCTGCATCAGAGACACCGGCAGGAAAGGCTCCAGCGGCATCAAGGAAGCAGATATCACCATCATCGGAGATCTCACCTTCATCTGCGACATCGCCTTCATCTGAGACTGCACCTTCATCGGAGAGCTCGGCTGCACCAGAGATCTCGCCATCTCCTGAAGAAGCGGAGTCACCATTGTCAGATGACGCTGCTCCAAGTGATGCTCCAGGTCCCGCTAGCGTCAGCTCTCCAAGGATCCAGATGGGCCTGGTTTGGGCCGAACTTATGGGCTTTGGAGCCCTTTTGGTTGCTATGTAA 981 0.5311 MDCRNSSLLGVALALLALSSAVEAFDITKMLAQYPELSSFSQYLTETKLADQINSRQTITVLTVDNSGISSISGKPQATIKSILSTHVILDYFDEKKLMSTVQSSQTELTTLYQTTGPTNPQMGFIKVGMIGEGEIAFGSAVKGTPIDVELVRTVVTQPYNISILQVVRPIIAPGIDGQSSSPSASSPASSSTPKARAPSSAPKPKAPSSPSASETPAAAKTPSASSPSASETPAGKAPAASRKQISPSSEISPSSATSPSSETAPSSESSAAPEISPSPEEAESPLSDDAAPSDAPGPASVSSPRIQMGLVWAELMGFGALLVAM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1521 326 MobiDBLite consensus disorder prediction 207 233 - -
Lele27g1521 326 Gene3D FAS1 domain 24 157 IPR036378 -
Lele27g1521 326 MobiDBLite consensus disorder prediction 177 198 - -
Lele27g1521 326 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 305 IPR033254 -
Lele27g1521 326 SUPERFAMILY FAS1 domain 31 119 IPR036378 -
Lele27g1521 326 MobiDBLite consensus disorder prediction 177 306 - -
Lele27g1521 326 FunFam Fasciclin-like arabinogalactan protein 3 24 171 - -
Lele27g1521 326 MobiDBLite consensus disorder prediction 243 275 - -
Lele27g1521 326 ProSiteProfiles FAS1/BIgH3 domain profile. 24 156 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1521 Lele-ChrLele27 21143941 21144921 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0558 25 3547435 3555297 Lele27g1521 27 21143941 21144921 hybridization
Lele26g0572 26 3646096 3646902 Lele27g1521 27 21143941 21144921 hybridization