LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele27g1351	ATGATAGCTTACCTGGAGCACTTCGTTCACGGAACTGACAAAGAATCGAGGCCCGACGACGACTTCGTCGGCCTCACCCAAGCGCTTGACCTCCAAGGCACCATCGACTGTGCACCCAACGGCGTCGCCAGTAAAGATTTCGGAGGCTTGCAGTCCGTGAAGCCCTTGGCCCTCATCAGGCCCGCCGACGCCGACGTCATCTCTCGGGTCCTTAAAGCAGCGGCCCGGTCGTCGAATCTGACAATTGCCGCTCGAGGCAACGGCCACTCGATCAACGGCCAGGCCATGGCCGATCAAGGAATCGTCCTAGACATGCGCAGCATGGAGGAGAATTTTCGCTTGGTGCAGGTTAATGGCTCAGCCTACGTCGACGTCTCGGCGGGGGCATTATGGGAAGGCGTCCTGAAAAGATGCGTAAGGAAGTTCGGGTTGGCCCCAAGGTCGTGGACGGATTATCTGGGGTTAACGGTTGGAGGAACGCTTTCTAATGCCGGGGTCAGCGGTCAAGCCTTCCGTTACGGTCCTCAAACTTCGAACGTAACGGAATTGGACGTTGTAACTGGCCAAGGTGATACGTTGGTCTGCTCCGAAACCGAAAATTCGGAGCTTTTCTTTGCGGCTTTGGGTGGTCTGGGTCAGTTCGGCATCATCACCAGGGCCAGGGTCGTGCTTCAACAAGCGCCAGATATGGTGAGGTGGATAAGGGTAGTGTACTCTGAATTTGAAGACTTCACTAGGGATGCCGAGTCTCTGGTAACTCGTCAAGAAGACGGCTCTTTCGATTACGTGGAAGGGTTCGTGTTTGTGAACAGCGAAGACCCTGCCAACGGGTGGCCCATAGTACCATTGGATCCGGACCAAGAGTTCGACCCGAACCACATCCCTCCCACCGCCGGCCCCGTCCTTTACTGCCTGGAGCTCGCTCTTCACTATCGTAACTCAGACCCCCCTTCAGACGTCGATGCGGATGTGGATAGATTGCTTCAACGGTTGCAGTTCCTCCGGGCCTTCAAGTTCCAGGTGGACGTGGGCTACATCCAGTTCTTGCTACGTGTTAAGCGTGCGGAGGAAGATGCTAAAGCCAACGGCATCTGGGATGCCCCTCACCCTTGGCTCAACCTCTTCATCTCCAGCCACAACATCGTTGATTTTGATCGTGTGGTGTTCAAGGGCATCCTCAGTCAAGGAGTTGGTGGACCCATCTTGGTCTACCCTCTCTTACGAAGCAAGTGGGATTCTCGAACCTCGGTGGCGTTGCCGGAGAGTGACATCTTCTACATCGTGGCACTGCTCCGATTTAACCCGTCGCCCCCAAAAGGACCGGCCCCGGAGTTGCTGGTGGCGCAAAACCAAGAGATCATTCAGTTTTGTAGCAGCAGAGGGTTTGATTTCAAGCTATACCTTCCTCACTACAAGTGTCAGGAGGATTGGAAGCGACATTTTGGGAATCAATGGACCAGATTCGTGAGCAGGAAGACCAGTTTTGATCCCTTGTTTATCCTTGCACCTGGACAGAAAATATTCTCCAGAAACCCCCAATCCTAG	1545	0.545	MIAYLEHFVHGTDKESRPDDDFVGLTQALDLQGTIDCAPNGVASKDFGGLQSVKPLALIRPADADVISRVLKAAARSSNLTIAARGNGHSINGQAMADQGIVLDMRSMEENFRLVQVNGSAYVDVSAGALWEGVLKRCVRKFGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGQGDTLVCSETENSELFFAALGGLGQFGIITRARVVLQQAPDMVRWIRVVYSEFEDFTRDAESLVTRQEDGSFDYVEGFVFVNSEDPANGWPIVPLDPDQEFDPNHIPPTAGPVLYCLELALHYRNSDPPSDVDADVDRLLQRLQFLRAFKFQVDVGYIQFLLRVKRAEEDAKANGIWDAPHPWLNLFISSHNIVDFDRVVFKGILSQGVGGPILVYPLLRSKWDSRTSVALPESDIFYIVALLRFNPSPPKGPAPELLVAQNQEIIQFCSSRGFDFKLYLPHYKCQEDWKRHFGNQWTRFVSRKTSFDPLFILAPGQKIFSRNPQS	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele27g1351	514	Gene3D	-	231	467	IPR016170	-
	Lele27g1351	514	ProSiteProfiles	PCMH-type FAD-binding domain profile.	51	227	IPR016166	GO:0071949
	Lele27g1351	514	Pfam	Cytokinin dehydrogenase 1, FAD and cytokinin binding	228	508	IPR015345	GO:0009690\|GO:0019139\|GO:0050660
	Lele27g1351	514	Gene3D	-	105	229	IPR016169	-
	Lele27g1351	514	Gene3D	-	43	509	IPR016167	-
	Lele27g1351	514	Pfam	FAD binding domain	55	196	IPR006094	GO:0050660
	Lele27g1351	514	PANTHER	GULONOLACTONE OXIDASE	18	509	-	-
	Lele27g1351	514	SUPERFAMILY	FAD-linked oxidases, C-terminal domain	228	508	IPR016164	GO:0003824\|GO:0050660
	Lele27g1351	514	SUPERFAMILY	FAD-binding/transporter-associated domain-like	42	224	IPR036318	GO:0050660

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele27g1351	Lele-ChrLele27	20055870	20059291	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele25g0732	25	4615895	4620611	Lele27g1351	27	20055870	20059291	hybridization
	Lele26g0739	26	4686385	4690131	Lele27g1351	27	20055870	20059291	hybridization