Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1315 ATGCAAGGGTTACGCCTCTGCTCAGACGACTTTGTCCACCTCGACCTCACTCCCTCCTCCACAGCCACCGCCGCCATGACCAACTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCCTATCCATCGACGTCGACGAATCCGCCGAGGCCAGAATCCAACGCCTGATCTCCGAGCATCCCGTCATCATCTTCAGCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTGCTTGCCACCATCGGGGTCCACCCCACCGTCATCGAACTCGACGACCACGAGATCGCCGCTCTCCCCACCTCCTCCGACCTCGACACTGAGTCCCTCCGCAACCGTGCTCCCGCCGTTTTCATCGGCGGAGCCTGCATCGGCGGTTTGGAGTCCCTGGTCGCCCTCCATCTCAGCGGCCATCTCGTCCCCAAGCTAGTGGAAGTCGGTGCTCTCTGGAATTTAGGAAAACCGTTTGTTGTTTGTTTTGGTTCTGTTGAGTATTCTGGGGCCTTTTGGGGGCAGTCAGCTGGAAACTTTGCTTGGGTTCTACAGCGTTCATTTCGCCGAGTCAAGTCAGAGAGTAACTCAGTCTCCGTGTCAGTCATTTTGGGTCCCATTCCCAATTATTTAGCACTCAGAGCGGTAGATGCATAG 645 0.5705 MQGLRLCSDDFVHLDLTPSSTATAAMTNSSSSSSSSSSLSIDVDESAEARIQRLISEHPVIIFSRSSCCMCHVMKKLLATIGVHPTVIELDDHEIAALPTSSDLDTESLRNRAPAVFIGGACIGGLESLVALHLSGHLVPKLVEVGALWNLGKPFVVCFGSVEYSGAFWGQSAGNFAWVLQRSFRRVKSESNSVSVSVILGPIPNYLALRAVDA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1315 214 Gene3D Glutaredoxin 41 150 - -
Lele27g1315 214 TIGRFAM GlrX-like_plant: glutaredoxin-like family 51 149 IPR011905 -
Lele27g1315 214 CDD GRX_GRXh_1_2_like 59 141 - -
Lele27g1315 214 Pfam Glutaredoxin 60 123 IPR002109 -
Lele27g1315 214 ProSiteProfiles Glutaredoxin domain profile. 48 149 - -
Lele27g1315 214 SUPERFAMILY Thioredoxin-like 49 149 IPR036249 -
Lele27g1315 214 PRINTS Glutaredoxin signature 60 78 IPR014025 -
Lele27g1315 214 PRINTS Glutaredoxin signature 106 119 IPR014025 -
Lele27g1315 214 PRINTS Glutaredoxin signature 120 133 IPR014025 -
Lele27g1315 214 PANTHER GLUTAREDOXIN 50 149 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1315 Lele-ChrLele27 19859649 19860599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1315 50 149 Miscellaneous Gene Families AT4G15690 43.000 2.17e-22 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0761 25 4825115 4825728 Lele27g1315 27 19859649 19860599 hybridization
Lele26g0768 26 4893203 4894046 Lele27g1315 27 19859649 19860599 hybridization