Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1313 ATGGCAGAGCCAACCAAGTACATTTCGCAGCAAGACCTCAGCAAACACAACAAGAAGGGAGATCTCTGGATCTCTATACAGGGCAAGATCTATGACGTCTCTCAATGGATTGATGCCCACCCCGGCGGTGAGCTTCCATTGTTGAATCTCGCCGGCCAGGATGTTACAAACGCCTTTCTTGCTTTCCACCCGGGATCTGCATGGCAATACCTCGACAAGTTCTTCACCGGGTATTATCTCCAAGACTACACCACATCAGAGGTGTCTAAGGATTATAGGAAACTTGTATACACGTTCACCAAAATGGGCTTATTTGAAAAGAAAGGACACGGTGTGTTCTTCTCAATGTTGTCCATGGCAATTTTGTTTTGTGTTTGTGTTTATGGTGTTTTGTGCTGTGATAGCCCATGGGTGCACGGGGGTTGCGGTGGGTTAATGGGGTTCTTGTGGATTCAGAGCGGGTGGATTGGACATGACTCTGGGCACTATCAGGTAATGACGAGTCGGGGATTCAATCAGTTCGCCCAGATCCTTACTGGGAATTGCCTTGCAGGCATCAGTATTGGATGGTGGAAGTGGAACCACAATGCTCATCACATTGCTTGTAACAGTCTCGAATTCGATCCTGATCTTCAGCATATGCCCTTTTTTGTGGTGTCTTCGAAATTTTTCAACTCCCTTAAATCTCACTTTTACGAGAGGAAGATGAATTTTGATTCTGTATCAAGATTCTTAGTTAGCTATCAGCATTGGACGTTTTATCCTGTAATGTGCTTTGCCAGAGTGAACTTATTCGCTCAATCGTTCATCTTATTGTTGTCAAAGAGGAAGGTACCTAACAGATGCCAGGAGCTTCTTGGGCTGCTTGTTTTCTGGATTTGGTATCCTTTACTGGTTTCCTGCTTACCCAATTGGTGTGAAAGAATATTTTTTGTCATTGCTAGCTTTGCTGTCACAGGAATACAACATGTTCAGTTCTGTTTGAATCATTTCTCTTCCAGTGTCTATGTCGGCCAACCAAACGCCAATGATTGGTTTGAAAAGCAGACCAGTGGGACGCTTGACATAAACTGCTCAGCTTGGATGGATTGGTTTCATGGTGGATTGCAATTTCAGGTGGCGCATCATCTGTTTCCCAGGATGCCACGTTGCCATTTGAGGAAAATCTCGCCTCCGGTTAGAGAGCTGTGCAAAACTCATAATTTGCCTTACAATTGTGTGTCATTCTGGAAAGCCAACGCACTTACAATTCAGACACTCCGAGATGCAGCCTTGCAGGCTCGTGATCTTTCTAATACAATTCCCAAGAATTTAGTTTGGGAAGCTGTTAACACTCACGGATAA 1344 0.4457 MAEPTKYISQQDLSKHNKKGDLWISIQGKIYDVSQWIDAHPGGELPLLNLAGQDVTNAFLAFHPGSAWQYLDKFFTGYYLQDYTTSEVSKDYRKLVYTFTKMGLFEKKGHGVFFSMLSMAILFCVCVYGVLCCDSPWVHGGCGGLMGFLWIQSGWIGHDSGHYQVMTSRGFNQFAQILTGNCLAGISIGWWKWNHNAHHIACNSLEFDPDLQHMPFFVVSSKFFNSLKSHFYERKMNFDSVSRFLVSYQHWTFYPVMCFARVNLFAQSFILLLSKRKVPNRCQELLGLLVFWIWYPLLVSCLPNWCERIFFVIASFAVTGIQHVQFCLNHFSSSVYVGQPNANDWFEKQTSGTLDINCSAWMDWFHGGLQFQVAHHLFPRMPRCHLRKISPPVRELCKTHNLPYNCVSFWKANALTIQTLRDAALQARDLSNTIPKNLVWEAVNTHG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1313 447 CDD Delta6-FADS-like 141 402 - -
Lele27g1313 447 PANTHER FATTY ACID DESATURASE 2 5 429 IPR012171 GO:0016491
Lele27g1313 447 Pfam Fatty acid desaturase 138 406 IPR005804 GO:0006629
Lele27g1313 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 82 IPR036400 -
Lele27g1313 447 SMART Cyt_b5_2 8 80 IPR001199 -
Lele27g1313 447 Gene3D - 1 86 IPR036400 -
Lele27g1313 447 PIRSF FA_sphingolip_des 1 434 IPR012171 GO:0016491
Lele27g1313 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 79 IPR001199 -
Lele27g1313 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1313 Lele-ChrLele27 19841796 19843139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1313 1 447 Lipid Metabolism Gene Families AT2G46210 63.029 0.0 636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0763 25 4843030 4844373 Lele27g1313 27 19841796 19843139 hybridization
Lele26g0770 26 4907941 4909284 Lele27g1313 27 19841796 19843139 hybridization