Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1300 ATGGTGGATTCTAGCGATTCAGTGTTGGTGGATATTGAAGCGATCTCTCCCAAGGCTAAGGAACATGTTGTAAAAACACGTCACGGTTCTGTCTCTGTTTCTGTGTATGGAGACCAGGACAAGCCAGCACTAATAACTTATCCAGATTTGGCTTTAAATTATGTCTCCTGCTTTCAGGGGTTCTTGTTTTGTCCTGAAGCGTATTCCTTGCTGCTCCATAATTTCTGCATATATCATATAAGTCCGCCTGGGCATGAGTTGGGAGCTGCTGCAATTGATCCTGATGATCCAGTGCTTTCAGTTAATGACTTAGCTGATCAGATAGCTGAGGTTCTAAATTTCTTTGGTCTCAGTGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTATGTTCTTACCTTATTTGCAATGAAGTATAGACATCGTGTCCTTGGTTTGATACTCGTTTCTCCTCTCTGTAAAGCACCATCTTGGACAGAATGGTTGTACAACAAGCTGATGTCAAAGTTGCTTTACTTTTATGGCATGTGTGGAGTGGTAAAGGAATTACTGCTGAAGCGGTATTTTAGCAAGGAAGTTCGAGGGAGTGCTCAATTACCAGAGTCAGACATAGTTCAAGCATGCCGAAGATCATTGGATGAGAAGCAGAGTTTGAATGTTTGGAGATTCCTGGAAGCTATTAATGGGAGATCCGATGTAAGTGAAGGATTGAGAAAATTGCAGTGTCGTTCCCTAATTTTTGTCGGTGATATGTCTCCATTTTACGCTGATACTCTCCATATGACTTCGAAGTTGGATAGACGATTCAGTGCCTTAGTAGAGGTTCAAGCATGTGGGTCAATGGTAACAGAAGAACAACCTCAAGCTATGTTAATACCAATAGAGTACTTTCTCATGGGATATGGCTTGTACAGGCCATGCAAGCCAAGTGTCAGCCCAAGAAGTCCCTTGAGTCCATCATGGATTTCTCCCGATCTTTATTCGCCGGAGAGCATGGGGTTGAAATTGAAACCCATAAAAACACGAATTTCTGTGGAAATGTTGACGTAG 1050 0.4267 MVDSSDSVLVDIEAISPKAKEHVVKTRHGSVSVSVYGDQDKPALITYPDLALNYVSCFQGFLFCPEAYSLLLHNFCIYHISPPGHELGAAAIDPDDPVLSVNDLADQIAEVLNFFGLSAVMCMGVTAGAYVLTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKLMSKLLYFYGMCGVVKELLLKRYFSKEVRGSAQLPESDIVQACRRSLDEKQSLNVWRFLEAINGRSDVSEGLRKLQCRSLIFVGDMSPFYADTLHMTSKLDRRFSALVEVQACGSMVTEEQPQAMLIPIEYFLMGYGLYRPCKPSVSPRSPLSPSWISPDLYSPESMGLKLKPIKTRISVEMLT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1300 349 PANTHER N-MYC DOWNSTREAM REGULATED 4 341 IPR004142 -
Lele27g1300 349 SUPERFAMILY alpha/beta-Hydrolases 24 298 IPR029058 -
Lele27g1300 349 Pfam Ndr family 21 305 IPR004142 -
Lele27g1300 349 Gene3D alpha/beta hydrolase 13 300 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1300 Lele-ChrLele27 19745258 19748870 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0775 25 4935653 4939613 Lele27g1300 27 19745258 19748870 hybridization
Lele26g0783 26 4990853 4994715 Lele27g1300 27 19745258 19748870 hybridization