Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1195 ATGCCGGAGTTGGGGTTTCGGGAGCGATCCTCGTCGAGGGCGGAGCTCAGACCTCGCGATTGTAGCCCGGACTCTGTTATATTTACTCTTGAATCTAACTTCAGTCTCTTCTCTTCTGCTTCTGCCAGTGTCGATCGCTGCTCCTTTGCATCTGACGTTCATGACCATGACTCTCTCGCCTCTGAAATCTCCCTGCAATTGGCACTGCGTGATGGTGATTTTTCTCCCACCGAGAATTGTAGTGGTCCAGATCCAGATTCAGATCCAAACAAACATGCAGCAAACAAGAAGCACAGTCGCCTCTTGAGAGGGGAAGAAAAAGCAAAAGTTCAAAAGGAAGACAGCGATGCTGACGACGTTGAAGACCGCAATCAACTCTTGGAATTGGATTCTGCTAGAAACTCTTTCTCTCTGGCCCTTAAAGAATGCCAAGATAGGAGATCAAGATTTGAAGCTTTATTGAAAAAGCCAGACCGGCGTAGGCCTGCTTCTTTAGATCTGAACAATGCAACCGGATCTTCACCTCGACTGGGAACCATGAAGAAGAGTTCAGTATCAACTCGCAAGTCTAACAATTTCCCTAGTCCTGGAACACCGAATTATCGGCATGCTGGTGGAATAATGCAGAAGGGTTGGAGCTCTGAGCGAGTTCCTTCGCATACCAGTGCTACCAGGAAGCAAGTCAGTGCGGCCCTGTTGCCTTTAAATAATGGAAGAACATTGCCATCAAAATGGGAAGATGCTGAGAGATGGATTTTCAGTCCTGTTTCAGTAGATGGTAAGGGGAAATGTTCCCTTCCACAACCCCAGAGGAGGCCAAAGTCAAAGAGTGGTCCTCTTGGTCCCCCTGGACTTGCGTATCATTCAATCTATTCACCGGCAGTGCCCATGCTAGAAGGTGGAAATGCTGGAAATTTCATGGCAGGTTCTCCATTCATAGCCGGTGTTATCCGAACCGATGGATTGACAATCCATTCCAGTGGCCATGGTGGTGGAGTACTTCCGACTCGAGCAGATCCTTGCATGGCCCGCTCTGCTAGTGTGCACGGATGCTCTGAGATGCAGAATCAATCATCTTTTTCTTCCCATGAGGAAAAGTTCTATGGTTCTAAGGATGGGGCCACCAATGTATCTCGTGTTGTTTCAAGGAGGGACATGGCCACCCAGATGAGTCCAGAGGGTAGTCCATGCTCCTCTCCCAGTATGAGGGCTTCTTTCTCCGTCTCCCCCACGCATGGTCTGCCCATCATAGATTTGCCGAGTGCCTCTTCTAATGTGGATATTAGAGATGTGCAGATAGATGAACGTGTCACCATGACAAGGTGGTCCAACAAACATAGAGCCCTATTCATTGGCAGAGGCTCAGAAACTGTTGACAACTGGAAAAAGAAAGAAAGAAGTGCCCAGTCTTCAGCTTGGGACGTTTCTGAAACTGCAAAGAGTGTTTCAAAGGTTAAGAGGGAGGAAGCTAGAATCTCTGCATGGGAGAACTTACAGAAGGCGAAAGCTGAGGCAGCAATAAGGAAACTAGAGATGAAGTTGGAGAAGAAAAGATCATCTTCTATGGATAAGATTATGAACAAGCTGAAATCGGCTCAAAAGAAAGCTCAGGAAATGAGAAGCTCGGTTTCCGACAACCAGGCTCATCACCATCAAGTTGGCAGAAATTTCCACAGGGCTCTATCTTTCAGTAGACCCAACCAGATGGGTTCTTTGAGTGGATGTTTCACCTGCCACGCCTTTTGA 1746 0.4765 MPELGFRERSSSRAELRPRDCSPDSVIFTLESNFSLFSSASASVDRCSFASDVHDHDSLASEISLQLALRDGDFSPTENCSGPDPDSDPNKHAANKKHSRLLRGEEKAKVQKEDSDADDVEDRNQLLELDSARNSFSLALKECQDRRSRFEALLKKPDRRRPASLDLNNATGSSPRLGTMKKSSVSTRKSNNFPSPGTPNYRHAGGIMQKGWSSERVPSHTSATRKQVSAALLPLNNGRTLPSKWEDAERWIFSPVSVDGKGKCSLPQPQRRPKSKSGPLGPPGLAYHSIYSPAVPMLEGGNAGNFMAGSPFIAGVIRTDGLTIHSSGHGGGVLPTRADPCMARSASVHGCSEMQNQSSFSSHEEKFYGSKDGATNVSRVVSRRDMATQMSPEGSPCSSPSMRASFSVSPTHGLPIIDLPSASSNVDIRDVQIDERVTMTRWSNKHRALFIGRGSETVDNWKKKERSAQSSAWDVSETAKSVSKVKREEARISAWENLQKAKAEAAIRKLEMKLEKKRSSSMDKIMNKLKSAQKKAQEMRSSVSDNQAHHHQVGRNFHRALSFSRPNQMGSLSGCFTCHAF 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1195 581 Pfam Remorin, C-terminal region 465 560 IPR005516 -
Lele27g1195 581 MobiDBLite consensus disorder prediction 166 198 - -
Lele27g1195 581 MobiDBLite consensus disorder prediction 152 202 - -
Lele27g1195 581 MobiDBLite consensus disorder prediction 74 120 - -
Lele27g1195 581 MobiDBLite consensus disorder prediction 89 120 - -
Lele27g1195 581 MobiDBLite consensus disorder prediction 260 281 - -
Lele27g1195 581 Coils Coil 522 542 - -
Lele27g1195 581 Coils Coil 500 520 - -
Lele27g1195 581 Coils Coil 110 130 - -
Lele27g1195 581 PANTHER OS02G0116800 PROTEIN 203 576 - -
Lele27g1195 581 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1195 Lele-ChrLele27 19016509 19019631 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0883 25 5653652 5656734 Lele27g1195 27 19016509 19019631 hybridization
Lele26g0894 26 5733604 5736804 Lele27g1195 27 19016509 19019631 hybridization