Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1179 ATGGAAAGTTCAGCTCTCCAAAAGATGGTGAAGATCACCCCATCGAGAGCTTTAGTCATCAGAATCAATCTGGTTTTCCTCGCCTTCTTTCTGATCGCCTACGCGACCTTTCTTCTCCGGCCATCCTCTTCAATCTACTTCGAGAATGCGGCCTCCGTCATGAGATGCTCATTGCGTGAATGCCATCATAAGGCAGAAAATAGCATTAAAATGAAAGCGGTGTTGGAGCAACCTCAGGTAAATTCACGGAGGCCGAAGGGTATTGCGAGTAAAGTAGAGATGCCAAGCCTCGTTCGAGAAATGGGGAAAGGGATGAAGATAGGGATGGTGAACATGGACGAAGACGATGTGGAGGAATGGAGATCAAAGGGAGAAGTAATAAATGTTGATTTCGACAGGGTATCAAAGATGTTCAACTGGACAGATTTGTTCCCAGAGTGGATAGACGAGGAAGAAGAGAGCGATGTTCCATCGTGCCCGGAGATACCGATGCCGGAGTTTGAAGCATACGGAAACATGGACGTGATCGTGGCTAAATTGCCATGCAAGTATCCAGAGGAGGGGTGGGCAAGGGACGTGTTTCGGCTACAAGTTCATCTGATAACGGCGAATCTGGCGATGAAGAAAGGGAAGAAGGACTGGGATTGGAAGACGAAGGTGGCGTTCTGGAGCAAGTGTAGGCCAATGATGGAGCTGTTCCGATGTGACGATTTGGTGACGCAAGAAGGTGACTGGTGGTATTATGAAACAGAGGTGAAGAGGCTGCAGAATAAAATGTCATTGCCTGTTGGTTCCTGTAAGCTGGCCCTGCCCCTCTGGGAACAAGGAATTGACCAAGTGTATGACTTGTCAAAAATTCGGAAAAGCGTGGCAAGCGGAACAAGAGTGAAACGCGAAGCCTACGCCACTGTGCTGCACTCTTCTGAATCCTATGTTTGTGGAGCAATATCGTTAGCACAGAGCCTCCTTCAAACCGGAACCAAACGCGACCTTATCCTCCTCATAGACAAATCTATCTCCGCTCCCAAACGCCAGGCCCTCGCCGATGCGGGTTGGAAGATCCGAATCATCACCCGGATTAGGAATCCCAGGGCCGAGAATGGCACTTACAACGAGTACAACTACAGCAAGTTCCGCCTCTGGCAGCTTACCGACTACGACAAGGTCATCTTCATCGACTCCGATGTCATCGTTCTACGCAACCTCGATATCCTCTTCCATTTCCCCCAAATGTCCGCCACCGGCAACGACCAATCCATCTTCAACTCCGGCATAATGGTCGTCGAACCTTCCAATTGTACCTTCCGTGTGTTGATGGACCGCCGGGGCGACATCATTTCTTACAACGGAGGAGACCAGGGGTTTCTGAACGAGATCTTCGTGTGGTGGCACAGATTGCCGAGGAGGGTGAATTTCCTGAAGAATTTTTGGGCGAATACGACGTTAGAAGCGAGCGTAAAGAATGGGCTATTCGGGGCGGATCCGCCGAGGCTGTACGCGATTCACTATCTAGGGCTGAAGCCGTGGCATTGTTACAGGGACTATGACTGTAACTGGGATGTGGAGGATCAGCGTGTGTATGCGAGCGACGTGGCTCACCGGAGGTGGTGGAGGCTGTACGATGAAATGGATGAGAAGTTGCAGAGTTTCTGTAGATTGACGAGACGACGTCGGACGGACTTGAATTGGGAAAGGAGGAAAGCTGGAAAGAAGGGATTGCCAGATGGACACTGGAAAATCAATGTTACAGATCCCAGAAGAGCTGGCTCTCTTTTGATGGATTAG 1785 0.5003 MESSALQKMVKITPSRALVIRINLVFLAFFLIAYATFLLRPSSSIYFENAASVMRCSLRECHHKAENSIKMKAVLEQPQVNSRRPKGIASKVEMPSLVREMGKGMKIGMVNMDEDDVEEWRSKGEVINVDFDRVSKMFNWTDLFPEWIDEEEESDVPSCPEIPMPEFEAYGNMDVIVAKLPCKYPEEGWARDVFRLQVHLITANLAMKKGKKDWDWKTKVAFWSKCRPMMELFRCDDLVTQEGDWWYYETEVKRLQNKMSLPVGSCKLALPLWEQGIDQVYDLSKIRKSVASGTRVKREAYATVLHSSESYVCGAISLAQSLLQTGTKRDLILLIDKSISAPKRQALADAGWKIRIITRIRNPRAENGTYNEYNYSKFRLWQLTDYDKVIFIDSDVIVLRNLDILFHFPQMSATGNDQSIFNSGIMVVEPSNCTFRVLMDRRGDIISYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNGLFGADPPRLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWRLYDEMDEKLQSFCRLTRRRRTDLNWERRKAGKKGLPDGHWKINVTDPRRAGSLLMD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1179 594 Pfam Glycosyl transferase family 8 304 408 IPR002495 GO:0016757
Lele27g1179 594 FunFam Hexosyltransferase 296 547 - -
Lele27g1179 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 189 588 - -
Lele27g1179 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 547 IPR029044 -
Lele27g1179 594 CDD GT8_Glycogenin 299 543 - -
Lele27g1179 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 548 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1179 Lele-ChrLele27 18927701 18930486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1179 71 593 Glycosyltransferase AT4G33330 67.420 0.0 749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0899 25 5754387 5757216 Lele27g1179 27 18927701 18930486 hybridization
Lele26g0906 26 5820043 5822928 Lele27g1179 27 18927701 18930486 hybridization