Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1034 ATGTTAGTTCCGGAAACCTCCCTGTTGAAGGCCTTCACTTTCGTTTCTTTTCGAGAGGGCGATATGGATGGTGGAAGAAGGATCACGGTGAGCCCTAGGCCCTGTAGTGGTCGCAGAGTAGTAGCGAAGAAGAGACAGCGTCGAGGTGGGGGAGTTGATGGGTTTGTTAACAGCGTCAAGAAGCTTCAGAGGCGTGAAATTAGCTCCAAGCGTGATAGAGCTTTCAGTATGAGCGATGCGCAAGAAAGATTTCGTAACATCCGCTTGCAGGAAGAATACGATACACATGATGCTAAAGGTCCTTCTTCTGTGGTACTTCCTTTTCTGAGAAAGAGGTCAAAAATTATTGAGATTGTGGCAGCACAGGACATAGTTTTTGCTCTTGCTCAGTCTGGTGTTTGTGCAGCATTTAGTCGAGAAACTAATCAAAGAATATGCTTCCTGAACGTGAGTCCAGATGAAGTTATAAGGAGTCTGTTCTATAATAAGAACAATGACTCGCTCATTACAGTTTCTGTTTATGCTTCAGACAGTTACAGTTCTTTGAAATGCAGAAGCACAAGGATTGAGTACATAAGGAGAGGTAAACCAGATGCTGGCTTTGCTCTTTTCGAATCCGAATCTTTGAAGTGGCCAGGTTTTGTTGAGTTTGATGATGTGAATGGGAAGGTTCTCACCTACTCTGCTCAGGATAGCATCTACAAGGTGTTTGATCTGAAAAATTATACGATGCTGTACTCAATTTCTGATAAAAATGTTCAAGAAATTAAGATAAGTCCGGGGATCATGTTGTTGATCTTTGCTAAAGCAAGCAGTCATGTCCCACTTAAAATCCTCTCAATTGAAGATGGTACTGTTTTGAAATCATTCAATCACCTCCTTCATCGGAATAAGAAGGTGGATTTCATTGAACAATTTAATGAAAAACTTCTTGTCAAGCAAGAAAATGAGAATCTCCAAATCCTTGATGTGAGAACATTTGAGTTAACAGAAGTTAGTAGAAGTGAATTTATGACACCATCTGCATTTATTTTTCTGTATGAGAACCAATTATTCCTGACCTTTCGCAATCGTACTGTGGCTGTTTGGAATTTCCGTGGAGAGCTTGTAACGTCTTTTGAGGATCACCTTTTGTGGCATCCTGACTGCAATACAAATAATATATATATAACTAGTGACCAAGATCTCATTATATCATACTGCAAGGCTGATTCTGATGATCCATTGTCTGAAGGAAATGCAGGATCCATTAATGTCAGCAACATTTTAACTGGCAAGTGTCTTGCTAAAATAAGAGCAAGCAATAGCTCACCCATGGAGAATGAATGCAGCTGTTGTGTCAAATGTTCAAGCAATGGTTGCAGTTCAAGGAAGCGAAAGTATACCGCCAGAATTAGGAGCACGGTTGCGGAAGCATTGGAAGACATTACCGCTCTATTCTATGATGAAGAGCGCAACGAGATCTATACTGGCAATAGACACGGTCTGGTTCATGTATGGTCTAACTGA 1509 0.4089 MLVPETSLLKAFTFVSFREGDMDGGRRITVSPRPCSGRRVVAKKRQRRGGGVDGFVNSVKKLQRREISSKRDRAFSMSDAQERFRNIRLQEEYDTHDAKGPSSVVLPFLRKRSKIIEIVAAQDIVFALAQSGVCAAFSRETNQRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDSYSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFAKASSHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRTFELTEVSRSEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLSEGNAGSINVSNILTGKCLAKIRASNSSPMENECSCCVKCSSNGCSSRKRKYTARIRSTVAEALEDITALFYDEERNEIYTGNRHGLVHVWSN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1034 502 Gene3D - 209 502 IPR015943 GO:0005515
Lele27g1034 502 PANTHER OS05G0482600 PROTEIN 22 502 - -
Lele27g1034 502 SUPERFAMILY Tricorn protease domain 2 131 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1034 Lele-ChrLele27 17921068 17924297 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0135 01 802673 803734 Lele27g1034 27 17921068 17924297 CCT
Lele02g0135 02 779059 780122 Lele27g1034 27 17921068 17924297 CCT
Lele03g0142 03 766745 768253 Lele27g1034 27 17921068 17924297 CCT
Lele04g0134 04 772137 774323 Lele27g1034 27 17921068 17924297 CCT
Lele25g1042 25 6744829 6748077 Lele27g1034 27 17921068 17924297 hybridization
Lele26g1049 26 6784682 6801273 Lele27g1034 27 17921068 17924297 hybridization