Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0793 ATGGTGGCCAACAAATTTGCGACCTTGCTTCACAAGAACACCAACACTCTGGTTGTGACTCTGGTTTATGCAGTTCTAGAATGGGTGTTGATTCTTCTTCTGCTTCTGAATTCTCTGTTCGGTTATGTCATCACAAAGTTTGCCAAATGGGTTGGCCTCAAGCCTCCGTGTCTGCTTTGTTCAAGGCTGGATCATGTTCTTGAGTCGCCGGAGAGTGATAAAAGCAAGGTTTTGCAGAGCGATGTTGTGTGTGAAACTCATGCGGCTGAGATTTCCAAGATGGGTTTCTGCTCAATCCATGGCAAAATGGCGGAGACTCAGAGCATGTGTGAAGATTGCTTGCTCTCCATTAGAGGCATGGCTTTCGTTTCGTGGTTTAGTGAGAAATCTGAGAGATGTTCTTGCTGTGATAAGAGCTTTAAAACTACTTTTACAAGCAAAGAGACATTGATTGTGGAAGCTTCAGATGACGATGATGAAGATGAGGAAGAAGAAGAAGGAGATAGAGGGTGTGATCATCAGATACTTTTTGATGTTGAGAGTTTTATACTCAGAGAAGTTGCAGAAGAACGTTCAAACAGTTCGGTTTCAAAGGATGCAGAGAAAGATCGTGAGAAAGAAGAAGATGATCTTCTTATCCTTACAGAGACGACGGATCCGATTACTGAATCTCACAATCTTCTTCGTCGTTTCTCTTCTGAATCTGTTTGGGAAGATAGATCGTTTGATTGCATCAGTATGCATTTTGAAAACAATGTAGATGATAAAGATCAGCGTGTAATACCTGTGGAGTTAATAGACTCTTTTACCTCTGCAAATTTTGAAGCTTGTAAATCAGAAGAGGTTCTTGAGAAGGACAAAAAGATCGAAACTTTAGCCTCTGGGTCATCAATTGAAGAGGAATTAAGCATGACTAGCTTGAAGAATCAAATGGTTTTGGGAGAAGAAGAAGGTGATGAAGAGTTAAGAAATGATGAATCAGCCATGGAAAAGCAAGAAGATGATGAACAAGCATTTGAATGCAACCAAGAAGATCGATCCTCATCATCAAGTGACGATGATGCTGAAGTCCAAAATGCATTTGATCAATTCATAGCTCAGAATAATATTTGCCAGTCTCATCAGTCTTTCTTCTGTGGAGACAATAACAAAGAAACAACCCCAGAAGAAGAAGAAGATGATACATTACAAGACGTGCCCTTTCACACAGACAATCTGCCGCAATCTGAAGAACCCTCTTATTCTTGCGAATGCATGGAAGAAGACCAATCCTTAACAAGTGACGATGATGCTGAAGTTCCTGATGCTTTTGATAAATTCATTGCTCAAAATAACCTTAGTCTAGTTGAAACTGGTGCAAATGATAATGAGCATGCCGACCCAAGTTTAGTTGAGGAAAATCATGAAAAAACAAACCATAATAATCATTCATCAAAATCCTCTGAGGAAGATGAAGTAGTAGTAGTAGTAGAAGAAGAAGAAGAAGACAAACTTCCTGAAACTCCAAGTTCTGTAGATGGCCCGCATAATTACCTGAATGGGAAACTGTTGCTTTATGAGAAAACAGAAGACTCTGTGCATGGAATAAGTGAGATAGAAACTAGCGGCTATTCCTCATCGACGATTGAACAGTTAAAAACAGCTCTGAAAGCAGAGAGAAAGGCTTTAAGTGCTCTATACCAAGAGCTAGAAGAAGAGAGAAGTGCCTCAGCAATTGCAGCAAACCAAACAATGGCTATGATCACAAGGCTGCAAGAAGAAAAAGCAGCAATGCAGATGGAGGCATTGCAATATCAGAGAATGATGGAAGAACAATCAGAGTATGATCAAGAAGCCTTGCAACTCTTAAACGATCTCATGGTGAAAAGAGAGAAAGAGAAGAAAGAGCTTGAGAAGGAGCTTGAAGAGTACAGGCAAAAGGTAATGGATTTTGAAGAAAAAGAGAAACTAAGACTCTTAAGAAGAATGAAAAATGGAAGTGACAGAACTAGAGAATCCTCTTCTTCTTCTGCTGCTTCTTTGGGTGAAGACATTACAGAGGAGCAATCATTTGATCTGAACTGTGAACCAGGGGAAGAAGAAGAAGAAGATAACAAAAACACAACTTCCATAGATACCGTTTCAAGCTTGGAGGAGATGACAATGGACTGTGTGAAGCACATGAATGCTCTAGATAGTTCATTAGCAGAATTTGAGGAAGAGAAACTGTCAATTCTAGATCAGCTCAAAGCATTAGAGGAAAAGCTCATAACTTTTGGTGATAAAGAGCAGCTTCTTGATGACTTGAATCAGAACTGCTTTTTTAGCAGCACCCCAGAAGAAGACATGTGCTGTAATAATAATAACAATAATGGGTATTCAGATGATAAACAATGTCACTCTCCAAGAATGCCAATGGCTTCTCTGGCAAAGAGGCTGCTTCCATTTTTAGATGCAGTAAATGATGAAGAAGAAGATGATACAGAAGAATCATATTCACGTGGATGGCATGAGGAAAACTCAGGAAATCTCACTGATGGTACAACAATGGCGAAAGTGTCCATTGAAAAAGAGGTTGATCATGTTTATGAGAAGCTACAAGCTCTTGAAAATAACACTGAGTTTCTGAAGAACTGCATGGGATCTACAGAGCAGGAGGGAGATCAGAAAGGAATGGATCTTCTTCAGGATATATTGCAGCATCTTCGTGATCTTAAGGCTATGGAACTTAAGCTAAATCAGTTGGGTGATGATGATCCACTGAGGTGA 2748 0.3981 MVANKFATLLHKNTNTLVVTLVYAVLEWVLILLLLLNSLFGYVITKFAKWVGLKPPCLLCSRLDHVLESPESDKSKVLQSDVVCETHAAEISKMGFCSIHGKMAETQSMCEDCLLSIRGMAFVSWFSEKSERCSCCDKSFKTTFTSKETLIVEASDDDDEDEEEEEGDRGCDHQILFDVESFILREVAEERSNSSVSKDAEKDREKEEDDLLILTETTDPITESHNLLRRFSSESVWEDRSFDCISMHFENNVDDKDQRVIPVELIDSFTSANFEACKSEEVLEKDKKIETLASGSSIEEELSMTSLKNQMVLGEEEGDEELRNDESAMEKQEDDEQAFECNQEDRSSSSSDDDAEVQNAFDQFIAQNNICQSHQSFFCGDNNKETTPEEEEDDTLQDVPFHTDNLPQSEEPSYSCECMEEDQSLTSDDDAEVPDAFDKFIAQNNLSLVETGANDNEHADPSLVEENHEKTNHNNHSSKSSEEDEVVVVVEEEEEDKLPETPSSVDGPHNYLNGKLLLYEKTEDSVHGISEIETSGYSSSTIEQLKTALKAERKALSALYQELEEERSASAIAANQTMAMITRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNDLMVKREKEKKELEKELEEYRQKVMDFEEKEKLRLLRRMKNGSDRTRESSSSSAASLGEDITEEQSFDLNCEPGEEEEEDNKNTTSIDTVSSLEEMTMDCVKHMNALDSSLAEFEEEKLSILDQLKALEEKLITFGDKEQLLDDLNQNCFFSSTPEEDMCCNNNNNNGYSDDKQCHSPRMPMASLAKRLLPFLDAVNDEEEDDTEESYSRGWHEENSGNLTDGTTMAKVSIEKEVDHVYEKLQALENNTEFLKNCMGSTEQEGDQKGMDLLQDILQHLRDLKAMELKLNQLGDDDPLR 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0793 915 MobiDBLite consensus disorder prediction 467 486 - -
Lele27g0793 915 PANTHER MYOSIN-BINDING PROTEIN 2 1 906 IPR039306 GO:0017022
Lele27g0793 915 Coils Coil 845 879 - -
Lele27g0793 915 Coils Coil 197 217 - -
Lele27g0793 915 Coils Coil 728 748 - -
Lele27g0793 915 Coils Coil 542 569 - -
Lele27g0793 915 Coils Coil 574 601 - -
Lele27g0793 915 MobiDBLite consensus disorder prediction 380 431 - -
Lele27g0793 915 Coils Coil 613 647 - -
Lele27g0793 915 Pfam Zein-binding 544 634 IPR007656 -
Lele27g0793 915 MobiDBLite consensus disorder prediction 656 683 - -
Lele27g0793 915 ProSiteProfiles GTD-binding domain profile. 540 638 IPR007656 -
Lele27g0793 915 MobiDBLite consensus disorder prediction 306 355 - -
Lele27g0793 915 MobiDBLite consensus disorder prediction 663 677 - -
Lele27g0793 915 MobiDBLite consensus disorder prediction 467 485 - -
Lele27g0793 915 MobiDBLite consensus disorder prediction 815 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0793 Lele-ChrLele27 16020441 16023714 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1295 25 8745988 8749234 Lele27g0793 27 16020441 16023714 hybridization
Lele26g1301 26 8647151 8650441 Lele27g0793 27 16020441 16023714 hybridization