Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0652 ATGCCTGATCTCCCACCTCAACCAGCATCTGCATCCCCATCCACTAAGCCAATCAAGCCCAATTCTATTGACCAAATCCCAGTAACAATACAATCCAGAAACCAAAGTTGGATGGAATTAGAATCACCAAATTTTGTCACAAAACAGTATAATAGACTATCAACAACACTGAGACAACCAAGAGTTCGAAGAACTAACCCAGCAGTATGGTTTGCTGCAGTTTTGTGCCTCATATTCAGCGTCCTCCTCATCTTCTTCGGAATCGCGACTCTGATCATCTTCCTCACCATGAAACCGCGAAATCCTATATTCGACATTTCCAATTCGAGCCTCAACGTCGTGTACTTCGACTCCCAGGAGTATCTGAACGGAGATTTTGTTCTGCTAGCGAATTTCTCGAACCCTAATAGGAGAATCGACGTGAGATTTGAATCTGGCGACATCGATCTTTTCTTCACGGACAGGGTTATATCGAGTCAGGCGATTCAGCCGTTCACGCAGAGGCGAAGGGAAACAAGGTTGCAATCGATTAACTTCATTTCGAGCTTGGTGTTTCTGCCTCAGGATCTAGGAGTAAAGCTTCAGAGGCAGGTTCAGAGCAACAAGGTGAACTACAACGTGAGGGCAACCTTCAGAGTGAGAGCCATTGTGGGGTTCGTTCATTTGTCGTTCTGGATCCATAGCACATGCCAGATTGAGATGACTGGTCCACCAGCTGGAGTTCAAGAAACCAGAATGTGCATAACAAAGCGATCATGA 759 0.4559 MPDLPPQPASASPSTKPIKPNSIDQIPVTIQSRNQSWMELESPNFVTKQYNRLSTTLRQPRVRRTNPAVWFAAVLCLIFSVLLIFFGIATLIIFLTMKPRNPIFDISNSSLNVVYFDSQEYLNGDFVLLANFSNPNRRIDVRFESGDIDLFFTDRVISSQAIQPFTQRRRETRLQSINFISSLVFLPQDLGVKLQRQVQSNKVNYNVRATFRVRAIVGFVHLSFWIHSTCQIEMTGPPAGVQETRMCITKRS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0652 252 Pfam Late embryogenesis abundant protein 133 230 IPR004864 -
Lele27g0652 252 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 244 - -
Lele27g0652 252 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0652 Lele-ChrLele27 14475898 14476656 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1315 01 8022088 8025389 Lele27g0652 27 14475898 14476656 CCT
Lele02g1587 02 19768565 19772132 Lele27g0652 27 14475898 14476656 CCT
Lele03g1329 03 8009167 8013016 Lele27g0652 27 14475898 14476656 CCT
Lele04g1577 04 20618183 20633716 Lele27g0652 27 14475898 14476656 CCT
Lele25g1430 25 10485389 10486144 Lele27g0652 27 14475898 14476656 hybridization
Lele26g1460 26 10366235 10366990 Lele27g0652 27 14475898 14476656 hybridization