Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1315 ATGGTAGCAAAAACTCTGCAGAATTCTACTAACTCTCCAAGTCCAAAACCAGAGGTTGGAGAGATTGATACTAGCCCACCTTTTCAGTCTGTTAAGGATGCTGTCACTCTATTCGGGTTAGGATCTTTATCCGGGGAAAAACCTGGGATTAGAAAGGCAAAGGCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCACTTATCCCAGAAAGAGCTGAACAAGTTAAAGGAACAGCTAAAGAATGCTGAAACCACTAAAGCTCAAGCTCAAGTGGAGCTTGAAAAGGCTAAAAGAACTGTTGATGATCTGACAGAAAAATTGAAGGCTCTAAATGAATCCAGGGCACTATCCATTAAGGCAACTGAAGCTGCTAAAAATCAGGCACAACAGGTTGAAGAAAAGTATGGCCACCATGATGGAAATAACGGTGCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAGAAGTATGCATCTGTTATCACAGAACTTGATGCTTCTAAGCAAGAACTGAGTAAGATTCGTCAGGAGTGTGATTCATCCTTGGAAGCAAGACTTTCTGCTTTCAAGCTATCATCGGAAGCCGAAGATTTGATGAAGGCAAACTCGGAAAGAGTGGCTGAGCTGTCTAAAGAAATTTCCTCTGTGCATGAATCAATTGAGCAAATGAAGCTTGCTACTGTGCAGGCACAGCAAGATCAAGCTAGGATATTATCTGAGAAAGATGTACTTAGACAGTCATATAAAGCCACCCTTGAAAATTCGCAAAAGAAATTGCTTGCTTTAAGAAAGGAATTCAATCCTGAGCTCACCAAATATCTTGAGGTGCAGCTGAGCGAGACAATGAATCAAATTGGGACTCTGCAAAAAGAAATGGAAAGTAAGAAGACGTCAGACTTAGATACTGTGAAAAGTGTCACGTTGGAGCTTGATGATGCTAAGGGATCACTGCAGAAAGTTGCAGAAGAGGAAATGTCTCTTAGAAGTTTGGTGGGAGCTCGTAAGGTGGAACTGGATAATGTGAAAAGGGAGCACTCTGAATTGAAGGAGAAAGAATCAGAAACTGAATCTGTTGTGGGGAACCTGCATGTCCAACTCCGGAAAAGTAAGTCTGAGCTGGAAGTGTGCATGGCAGAAGAGTCCAAGGTTAGAGGTGCGTCTGAGGAAATGATTTTGACACTGAACCACTTGTCATCTGAAACTGAAAATGCACGGAGGGAAGCTGAAGATATGAAGGCTAAGGCCGAAGAGTTGAAGAAGGAAGCTGAAGTCACCAAAGTTGCATTAGAAGATGCAGAGAAAAAGCTTAGAGTAGCGCTGGAAGAAGCAGAAGCAGCAAAAGCAGATGAGGCAGGTGCTCTTGATCAGATTAGGGTCTTAACTGAGAGGACTAGTGCAGCGCGTGCATCAACTTCTGAATCTAGCGCCAAAATTACAATTTCAAAAGAGGAGTTTGAATCATTGAGTCAAAAAGTTGAGGAGTCTGATAAATTAGCAGATATGAAAGTAGCTGCTGCCATGGCACAGGTTGAAGCAGTGAAGGCCAGTGAACAGGAGGCGATCCAAAGGTTAGAGGCAACTCAGAAGGAGATAGAGGATATGAAGGCTGCAACACAGGGGGCCTTGAAAAAGGCTGAGATGGCTGAAGCTGCAAAGAGAGTTGTGGAGAACGAGCTTCGCAAATGGCGTGAACGCGAGCAGAAGAAAGCAGCAGAAGCCGCATCGCGTATATTGGCTGAAACACAGGTTTCATCAGAGTCATCTCCACTCCATTATACGATTCAAAAGCCAATTCAACCTACAAAAGCTGTTGAGGTGCGCAAATTGGAGAAAGAAAAGGTTTCAATTTCAAAGAAGGTACTCCTGCCTAATCTATCCGGCATCTTTCACCGGAAAAAGAACCAGATCGAGGGCGGATCTCCATCTTACCTGCCCGGTGAAAACCCAGTGTGA 1959 0.4364 MVAKTLQNSTNSPSPKPEVGEIDTSPPFQSVKDAVTLFGLGSLSGEKPGIRKAKAYSAERVLAKETQLHLSQKELNKLKEQLKNAETTKAQAQVELEKAKRTVDDLTEKLKALNESRALSIKATEAAKNQAQQVEEKYGHHDGNNGAWKEELETAVKKYASVITELDASKQELSKIRQECDSSLEARLSAFKLSSEAEDLMKANSERVAELSKEISSVHESIEQMKLATVQAQQDQARILSEKDVLRQSYKATLENSQKKLLALRKEFNPELTKYLEVQLSETMNQIGTLQKEMESKKTSDLDTVKSVTLELDDAKGSLQKVAEEEMSLRSLVGARKVELDNVKREHSELKEKESETESVVGNLHVQLRKSKSELEVCMAEESKVRGASEEMILTLNHLSSETENARREAEDMKAKAEELKKEAEVTKVALEDAEKKLRVALEEAEAAKADEAGALDQIRVLTERTSAARASTSESSAKITISKEEFESLSQKVEESDKLADMKVAAAMAQVEAVKASEQEAIQRLEATQKEIEDMKAATQGALKKAEMAEAAKRVVENELRKWREREQKKAAEAASRILAETQVSSESSPLHYTIQKPIQPTKAVEVRKLEKEKVSISKKVLLPNLSGIFHRKKNQIEGGSPSYLPGENPV 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1315 652 Coils Coil 340 360 - -
Lele01g1315 652 Coils Coil 159 179 - -
Lele01g1315 652 MobiDBLite consensus disorder prediction 402 421 - -
Lele01g1315 652 Coils Coil 247 267 - -
Lele01g1315 652 MobiDBLite consensus disorder prediction 1 18 - -
Lele01g1315 652 Coils Coil 194 214 - -
Lele01g1315 652 MobiDBLite consensus disorder prediction 401 421 - -
Lele01g1315 652 MobiDBLite consensus disorder prediction 1 27 - -
Lele01g1315 652 Coils Coil 61 116 - -
Lele01g1315 652 Coils Coil 509 567 - -
Lele01g1315 652 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 20 623 - -
Lele01g1315 652 MobiDBLite consensus disorder prediction 633 652 - -
Lele01g1315 652 Coils Coil 396 451 - -
Lele01g1315 652 Pfam Weak chloroplast movement under blue light 21 570 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1315 Lele-ChrLele01 8022088 8025389 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1315 01 8022088 8025389 Lele25g1430 25 10485389 10486144 CCT
Lele01g1315 01 8022088 8025389 Lele26g1460 26 10366235 10366990 CCT
Lele01g1315 01 8022088 8025389 Lele27g0652 27 14475898 14476656 CCT
Lele01g1315 01 8022088 8025389 Lele03g1329 03 8009167 8013016 hybridization
Lele01g1315 01 8022088 8025389 Lele04g1577 04 20618183 20633716 hybridization