Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0134 ATGAGACATCCTCGTCACCTACGCAAGATGGGATTGTGGCGGTTGGGATTTTGGAGGAATGTTTTGGTGTTTATGATGGTTGGGGTGTTATGGAACCTGAAAGGGTCCGAAGGGATTAGGTTTGTGATAGACAGACAGGAATGTTTATCGCATAATGTTAAATATCAGGGTGACACAGTCCATGTTTCTTTCGTTGTTATTAAGGCTGACTCTCTCTGGCGATTTGGCGGCGGCGGCGGCGAAGGAATCGATCTTGTGGTAACGGGACCTTCGGGTGAGCAAATTCAAGATTTTCGTGACAAGACGGCTGAGAAGTTTGAGTTTACAGCTCACAACTCAGGTGTCCATAAGTTCTGCTTCACCAACAAGTTTCCAGCTCACGAAACCATTGACTTTGATGTACATGAAGATCACTTCTCTTACTACGACCAACACGCAAAAGACGAACATCTGAATCCTTTGCTGGAGCAGATAGAGAAGTTGGATCAAGCTCTATACAGCATTCAGTTTGAACAGCACTGGCTAGAGGCTCAGACTGATCGCCAAGCAATAGTGAATGAGGAAATGAGCCGGAGAGCAGTTCACAAGGCTCTTTTTGAATCAGCAGCCCTAATAGGCGCGAGCGCGTTACAGGTCTACTTTTTGAAGCACTTGTTTGAGAAGAAGGTCGTTACCAGAGTTTGA 684 0.4591 MRHPRHLRKMGLWRLGFWRNVLVFMMVGVLWNLKGSEGIRFVIDRQECLSHNVKYQGDTVHVSFVVIKADSLWRFGGGGGEGIDLVVTGPSGEQIQDFRDKTAEKFEFTAHNSGVHKFCFTNKFPAHETIDFDVHEDHFSYYDQHAKDEHLNPLLEQIEKLDQALYSIQFEQHWLEAQTDRQAIVNEEMSRRAVHKALFESAALIGASALQVYFLKHLFEKKVVTRV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0134 227 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 23 222 IPR015720 -
Lele27g0134 227 Pfam emp24/gp25L/p24 family/GOLD 45 220 IPR009038 -
Lele27g0134 227 ProSiteProfiles GOLD domain profile. 46 136 IPR009038 -
Lele27g0134 227 SMART EMP24_GP25L_2 38 220 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0134 Lele-ChrLele27 1066679 1070396 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1939 25 27042833 27045212 Lele27g0134 27 1066679 1070396 hybridization
Lele26g1984 26 23250376 23254543 Lele27g0134 27 1066679 1070396 hybridization