Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1162 ATGGCCCCACTGTCTTTATGGCGCGCTGGGACGAGGCTTGCTCTGACTGCCTCCTCCATTGGCGGTGGTGCCGCCGCCGCCGCCGCCATAGCCACCTCTGATGACCCTGAAGCTACCCTCAAGCTTTGCGCCACTGTCCCCCATCGACTCATCCGCGACGCCATCACCGCTGCCAGCATTGCTTTCGATTATGAATATTCTCTTTGGGGACTGCCTGAAGGAAGTAATGAGCGGTCAAAAGTCAAGCACGAAGTTCACCTCCGCTCTGCACATAAACTTCAAGAACTGTGTTTTAAGAACGGAGGGGTTTATATAAAGCTTGGCCAACATATTGGGCAGTTGGAATACTTAATTCCTCAAGAATATGTTCAGACAATGAGGGAGTCCATGTTGAATAAATGTCCAGTTTCTTCATATGATCAAGTATGCGACGTCTTTAAGAAAGAACTTGGAGAAACACCTGATACAATATTTTCTGAATTTGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCCCAAGTTCATATAGCCCGCACCCATGATGGCCAAAAAGTTGCTGTGAAGGTTCAACATACTCACATGACTGATACTGCGGCTGCAGATCAAGCTGCTGTGGAATTGGTTGTGAACACTTTTCATAGGATTTTCCCCAGCGTTGATTATAGATGGTTGGTTGATGAGATACGGGAAAGTTTACCTAAGGAATTGGACTTTCTGATTGAGGGAAAGAATAGTGAGAAATGTTTGGAGAACTTCCGGAAGTTTTCTCCTCATATTGCAAACTATATATATGCACCGAAAGTGTATTGGAATCTAAGCACCTCGAAGTTGCTAACAATGGAATTCATGGATGGTGCGCAAATAAATGATGTAAAGACAATTAGAAGACTTGGGATCCATCCACATGAAGTTTCAACATTGGTCAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGATTTGTGCATTGTGATCCTCATGCTGCTAACCTACTGGTTCGTCCATTGCCTTCTAGCAGAATGAACATCCTGGGCAAGAGGAAGCCACAGTTGATTCTTTTAGATCATGGACTTTATAAAGAGCTTGATTTCCATACAAGAACCAATTATGCTTCCCTATGGAAGGCATTGGTATTTTCTGATGCTAAGGCAATAAAGAAGTATAGTGCAAAATTAGGTGCTGGAGAGGATTTATATGCACTATTTGCTGGAGTTCTAACCATGAGACCATGGAATAGAGTTGTTGACCGAGCTGTGGATCATTTAGTTATACAGGGAAGTGAGAGTGCGAGATCAGAATTGCAGATGTATGCTTCTCAGTATTTCCCTCAAATATCAGAGCTTCTGAGGAGATTACCACGCGTAATTCTTTTAATGCTGAAGACAAATGACTGTTTACGTTCAGTTAACAATTCTCTGTTGCAGGGATCTTCTCTGGAGACGTTTTATATCATTGGCAAGGTTTCTTCGAAGGCTTTGATTGAGGCAAAGATGTCGCAAAGCAAATCCCTTCTAACTTGGTTGAGTGTTATATTGGATGACATATCGCTGGAAGTGCGGCTCTGGGGAATGCAGATCGCGTTGTGGCTTTTACGACTCAGAAAGGCCTTGTCTTGGTCAAACCAAGGATCATAA 1635 0.4343 MAPLSLWRAGTRLALTASSIGGGAAAAAAIATSDDPEATLKLCATVPHRLIRDAITAASIAFDYEYSLWGLPEGSNERSKVKHEVHLRSAHKLQELCFKNGGVYIKLGQHIGQLEYLIPQEYVQTMRESMLNKCPVSSYDQVCDVFKKELGETPDTIFSEFDPVPIASASLAQVHIARTHDGQKVAVKVQHTHMTDTAAADQAAVELVVNTFHRIFPSVDYRWLVDEIRESLPKELDFLIEGKNSEKCLENFRKFSPHIANYIYAPKVYWNLSTSKLLTMEFMDGAQINDVKTIRRLGIHPHEVSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSRMNILGKRKPQLILLDHGLYKELDFHTRTNYASLWKALVFSDAKAIKKYSAKLGAGEDLYALFAGVLTMRPWNRVVDRAVDHLVIQGSESARSELQMYASQYFPQISELLRRLPRVILLMLKTNDCLRSVNNSLLQGSSLETFYIIGKVSSKALIEAKMSQSKSLLTWLSVILDDISLEVRLWGMQIALWLLRLRKALSWSNQGS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1162 544 Pfam ABC1 atypical kinase-like domain 130 388 IPR004147 -
Lele26g1162 544 PANTHER ABC1 FAMILY PROTEIN 27 512 - -
Lele26g1162 544 SUPERFAMILY Protein kinase-like (PK-like) 135 334 IPR011009 -
Lele26g1162 544 CDD ADCK1-like 129 393 IPR045307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1162 Lele-ChrLele26 7531161 7538759 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1162 26 7531161 7538759 Lele26g1162 26 7531161 7538759 ECH
Lele26g1162 26 7531161 7538759 Lele27g0916 27 17112406 17121366 hybridization
Lele26g1162 26 7531161 7538759 Lele28g1154 28 7509419 7516517 hybridization