Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1099 ATGCAAAACGTCGCCGTTTATGCGAGTGTCACTGTGCACTTTCCATGCGGACAGGCCAATCATCACTGCAACAGTGCAACTCTGTCAATGCCTTTCCCCCCATATGATTATTCCCTGAGAAAGGCTTCTTCCCCGCTTCACAAAAGGGAAAAGGCCCTCTTTTGCCTTTTCCCGCTTTACCGTTTTGCGCTCACTTTTATCCGCTCAGTGGGCAATGGAGTGTAATGGATCCGTCCCGGAAGTCCAGGCTCAGGCCTTTTGGCCCTTTTAGCTGTGGGTGCTTCTCTGAATCTCGCTTTTGTACTAGTTGTTGCGATGGCTGAAACCCAGGAAGTAACTGTCGAGGGGGTTCCGGGAACGCCTTCCATAAGGGAGGTGAGACCCGAGAAGGTGTCTGAAAAGCTCAATGCTGGAAACGGGTCAAGTGGGAACCCCAGTTTTGGCATCAAACGAGTTAATTTGAGAGCTGAGATTGACACATCGCCGCCATTCGGGTCGGTTAAAGAGGCAGTGACCCGTTTTGGAAGTAGTGGACCTTGGCCACCTCTTTACAAGCTTGGAGAGGCTTTTAACGGAATTGATGGTTTTGACATAAAGAAAGTGGAGGAACAAGCAGCAGAGTTGGAGAAAGATTTGATAGTGAAAGAACTCGAAACACTTGATGTGCTTGAAGAACTGGGGGGCACTAAAAGGATAGTGGAGGAATTAAAGCATCTGCTACAGAAAGAAGCCTTAAAAGGTTTTGTAACTCCTGAAGTCCATGCCGATGAACTGGTTGGGCCTCCTGTTATTAAGGAGATGAATAAGGAAAATTATGGCAATATCGTCAACAACCAGGAAAAGATATTTCATGGTTCAACCCCCTGCTCTATCTCATCACCTGATCTAATCTTAATGGAGTTAAAACAAGCTAAAGTTAATCTCGGTAAGACCATGAATGATCTTGAGGCGATACAATCTTCTGTCGAATCTTTGAATAAGAAGATGAAAGAGGAAAATATTTTTCTTGAGAGGACACACGAAATGCAAGCATCAAAATATGCAGCTGTTTGTAGTCAAGAGAGAGCTGAAGAACAAACTAGAATGAATCCTCCTGTATCTCCTGTAGAAACAAGTAGCGTTTTCGGTGATCCCATGAATATGATGAAGAGTTTTAATTCTGACGCTGGACAGTACCATAGAATGGTTGAAACAAGATCTGAAGTTTCAAGTCCCTTCAATATATATGAAGAGAATGGATTTGGTATTAAGACTGCAGAGATGAGGTGGTTGGCAGCTAAGAAGATGGAAGAAGCTGCAAGGGCAGCAGAAGCCATTGCTCTTGCTGAAATCAAGGCACTATCCAGCACTGAGAGATCATCTGGCTTTGTCCTACCAGAGGCTGAAAAAGTGACTTTGCCTTTAGGGGAGCGATCTCTAACCCCTGAACCAAAAGTACCCGAAGAGTCCACCATGAAGAAGGTTGTAGATTCCAAGTTTCAAATGGATGATACAAGTATTTCTAAATTGACTATTCTGAAAAGGATGGAGGAAGCAACAGAAGAAGTCCGACGTAGCAAGCAAATCTTGACAGAAGCTCTGAACAGAGTTGAAACTGCAAACAGGAAGCAACATGCTGCCGAAGAAGCTCTTAGGATATTGATTCCAGAGAGTGATCTCAAGGGACAAAACGTGTATAACTCTATTAAGTGCAACAAATTCAGTTTAGCTGGAAACTGTCAGGATTCTCCTCTACCAGACGTAACCAAATCAAACCCGGCGAACAACAATCCGAAGCCTGCTTTAAGGCCAACAGTTTCAATGAGAGATGTGCTAAGCAGAAAGCAAGTTCCCGAAGAATATGCCACAAGAAAGGATATGGAAGAGCATAGTGAGAGACAAAAGGTTGCTTTGAGCCAAATGCTGCGTGCACTAAGGGAAGATCTTACTCTTCCTCCAAAACCTGAGAAAGAAGAGAGCGATCAGAAGCAGTGTATAGCCCAGAGGAAGAAGTTTGGATTCATTCAAATATCACTCCCATTGTCAAGGCCAAGATTTGTTCTTGAGCAGTTGGTTTGCAATGAAATGATTAAGGGCATCGAGACTTCACTATCGGGATCCGCTTACATGTCCATGTGCTTTTTGCTTCTGTCTAACGTCCGTTGCAATATGCTTGTAGGATGGGGGTCACTGAGTCGAAGCGCTTTAATGGCGACAATGTACAGAAACAGGAAAAGGGTCAGCGCCTTTCGCCGTGCTCCCGATGGAAGCGCTTTTGAGCAGTGGTATATACTATATAGCTGTGGATGTGGGAGATCGATGGCTATTGCGTTGGCTGACATGCACGAATGTGAACCGAAGAAGGGCCTAAAAAGGTTCAGGGGAATAAATGTGAACCAACTAACGAATAAATGTTCTGAAGATGTGAACCAGCATACGACGAATACAAGTTCTGAAGATGTGAACCAACATGGGACAATTAAAAGTTCTGAAGATGTGAAACAACAAATGGCAAATAAAAGTTTTGAAGACCAACCAATATCACCTTTCCTTTTGGAAGGCTTTGTCAAGACCAACAATTGTGGAACTACGATTGAAATTGATAGGAAAGGGTTTGAGACCTGGAAAAACATGTCCAAGGAGGAAAGGCAACCGTTTGTTCTTCATGCTCAAAAACTAGAATCTGCATACCAAAAAGCTTTGGATAAAGAGGTTAATGATATGATACAGTTGCAAACCTCACCACCTTGCTTGTCTCTCATTCTTTCAAAATTTGAGATTCCTACTATATATATGACAAGTGGCTGGTTTCAGGTGGATGATGAGGCTGATTCAGCGATGATTGGGAAGATATATAAGTCTTACCAGTTCTGTTGTGAAGAACCATCAAATTACTCTGAATATTGCTCAGAATACTCGATGACTGGTTTACAGTGGAGTTTCAGCCTACAATTTCTACTTCTTTGTGCTTTCCAGCGAGGAGCTAGCTTTTACATTATGAAGCAGGAGGAGTTTTTGTTTTGGGGCTCTCCTTGCTGA 3018 0.4331 MQNVAVYASVTVHFPCGQANHHCNSATLSMPFPPYDYSLRKASSPLHKREKALFCLFPLYRFALTFIRSVGNGVXWIRPGSPGSGLLALLAVGASLNLAFVLVVAMAETQEVTVEGVPGTPSIREVRPEKVSEKLNAGNGSSGNPSFGIKRVNLRAEIDTSPPFGSVKEAVTRFGSSGPWPPLYKLGEAFNGIDGFDIKKVEEQAAELEKDLIVKELETLDVLEELGGTKRIVEELKHLLQKEALKGFVTPEVHADELVGPPVIKEMNKENYGNIVNNQEKIFHGSTPCSISSPDLILMELKQAKVNLGKTMNDLEAIQSSVESLNKKMKEENIFLERTHEMQASKYAAVCSQERAEEQTRMNPPVSPVETSSVFGDPMNMMKSFNSDAGQYHRMVETRSEVSSPFNIYEENGFGIKTAEMRWLAAKKMEEAARAAEAIALAEIKALSSTERSSGFVLPEAEKVTLPLGERSLTPEPKVPEESTMKKVVDSKFQMDDTSISKLTILKRMEEATEEVRRSKQILTEALNRVETANRKQHAAEEALRILIPESDLKGQNVYNSIKCNKFSLAGNCQDSPLPDVTKSNPANNNPKPALRPTVSMRDVLSRKQVPEEYATRKDMEEHSERQKVALSQMLRALREDLTLPPKPEKEESDQKQCIAQRKKFGFIQISLPLSRPRFVLEQLVCNEMIKGIETSLSGSAYMSMCFLLLSNVRCNMLVGWGSLSRSALMATMYRNRKRVSAFRRAPDGSAFEQWYILYSCGCGRSMAIALADMHECEPKKGLKRFRGINVNQLTNKCSEDVNQHTTNTSSEDVNQHGTIKSSEDVKQQMANKSFEDQPISPFLLEGFVKTNNCGTTIEIDRKGFETWKNMSKEERQPFVLHAQKLESAYQKALDKEVNDMIQLQTSPPCLSLILSKFEIPTIYMTSGWFQVDDEADSAMIGKIYKSYQFCCEEPSNYSEYCSEYSMTGLQWSFSLQFLLLCAFQRGASFYIMKQEEFLFWGSPC 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1099 1005 SUPERFAMILY HMG-box 848 896 IPR036910 -
Lele26g1099 1005 Coils Coil 298 318 - -
Lele26g1099 1005 Pfam Weak chloroplast movement under blue light 299 546 IPR008545 -
Lele26g1099 1005 Pfam Weak chloroplast movement under blue light 156 242 IPR008545 -
Lele26g1099 1005 Coils Coil 198 218 - -
Lele26g1099 1005 MobiDBLite consensus disorder prediction 606 627 - -
Lele26g1099 1005 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 156 242 - -
Lele26g1099 1005 Coils Coil 506 543 - -
Lele26g1099 1005 MobiDBLite consensus disorder prediction 573 595 - -
Lele26g1099 1005 MobiDBLite consensus disorder prediction 573 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1099 Lele-ChrLele26 7106914 7113801 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1099 26 7106914 7113801 Lele26g1099 26 7106914 7113801 ECH
Lele26g1099 26 7106914 7113801 Lele28g1093 28 7100091 7103199 hybridization