Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0777 ATGGAACGTGCACGGCGGATCGCGAATAGGGCGATTCTGAGACGCCTCGTTTCACAAGCGAAGCAGTACCGCCAGAATGAATCTTCGCTGAACTCTTCCACACCTGTACTGTACACACCTTCTAGGTATGTATCATCTCTTTCTCCCTCTGCTTTTAGAGGCAGAGGATCCAAATCTGAGAACCTTCAGGGCGGGAATGCTCTGTCACGTAATGTTGCTTTCTGGGCTTTCCAATCTCGATCGATTTCGGTTGAGGCACTCAAACCCAGTGACACTTTTCCTCGTCGCCATAACTCTGCAACCCCTGAGGAACAGAGCAAAATGGCTCAGTCGTGTGGATTCGACAATCTTGACTCGCTCATCGATGCCACCGTGCCTAAATCGATCCGGTTGAATGATATGAAGTTTAACAAGTTTGACGAGGGAACGACGGAGAGCCAAATGATCGAGCACATGCAGTATCTGGCGGCCAAGAACAAAATTTTCAAGTCATACATTGGAATGGGGTACTATAACACCTATGTTCCACCTGTGATTTTGAGGAACATAATGGAAAATCCAGCTTGGTATACCCAATATACTCCTTACCAGGCTGAGATATCCCAAGGACGTCTTGAATCCTTGCTTAATTTTCAGACCATGATCACTGATCTTTCTGGTCTACCTATGTCCAACGCTTCGTTGCTAGATGAAGGAACTGCCGCCGCTGAGGCAATGGCAATGTGCAACAATATTCTGAAGGGAAAGAAAAAGACTTTTATCATTGCCACCAACTGTCATCCTCAGACAATTGATATTTGTATGACTAGAGCAGAAGGTTTTGATCTCAAGGTTGTTACGGCAGATGTCAAGGATATTGATTATAAATCGGGTGATGTTTGTGGTGTGCTTGTTCAGTACCCGGGCACCGAGGGTGAGATTTTGGATTATGGTGAGTTTATTAAGAAAGCTCATGCTCACGGAGTTAAGGTTGTAATGGCATCGGATCTTCTTGCTTTGACTGTGTTGAAGCCTCCCGGTGAACTCGGAGCAGATATTGTTGTCGGCTCAGCTCAGAGGTTTGGAGTTCCAATGGGTTATGGAGGTCCTCATGCGGCTTTCCTGGCCACATCCCAAGAGTACAAGAGGATGATGCCTGGAAGAATTATTGGTGTCAGCGTTGATTCTTCTGGAAAACCAGCCTTGCGTATGGCAATGCAAACCAGAGAGCAGCATATCCGTAGAGACAAGGCGACTAGCAATATATGTACTGCCCAGGCACTGCTTGCGAACATGGCTGCTATGTATGCTGTTTATCATGGACCTGAAGGACTTAAAACTATCGGCCAACGAGTTCATGGTCTCGCTGGGGTATTTGCTCTTGGATTAAAGAAACTTGGAACAGTTGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTGCTAATGCTCATGCAATTGCCGATGCTGCTTACAAAAGTGAGATAAATTTGCGAGTCGTTGATGGAAACACTATCACTGTTTCCTTTGACGAGACAACCAATTTGGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGCAAGCCTGTCTCCTTCACAGCTGCTTCTCTTGCTCCAGAGGTTCAGACCACACTTCCTTCTGGACTAACTAGGGAGAGCCCTTATTTGACGCATCCTATCTTTAACACGTACCATACTGAGCATGAGTTGCTAAGGTATATTCATCAGCTACAGTCGAAAGATCTCTCACTATGCCACAGTATGATTCCACTTGGATCTTGCACAATGAAGCTGAATGCCACAACTGAAATGATGCCAGTGACATGGCCTGGCTTTACTGACATTCACCCTTTTGCACCTGCTGAACAAGTTCAAGGTTATCAGGAAATGTTCGATAATTTGGGCGATCTATTGTGTGCCATCACTGGGTTTGACTCATTCTCTTTGCAACCTAATGCTGGCGCTTCTGGAGAATATGCTGGACTTATGGTTATTCGTGCATACCACAAGGCAAGGGGAGACCACCACCGTAATGTTTGCATCATACCTGTCTCAGCACATGGCACAAACCCAGCCAGTGCTGCTATGTGTGGAATGAAAATTGTCCCTGTTGGAACCGATGCCCATGGAAATATCAATATTCAAGAGTTGAAAAAGGCTGCTGAGACAAACAAGGATAACTTATCCGCACTTATGGTTACATATCCTTCAACTCATGGTGTTTACGAGGAGGGTATTGATGAGATATGCAAGATTATTCATGATAATGGAGGTCAAGTGTATATGGATGGGGCCAACATGAATGCCCAGGTGGGACTCACAAGCCCTGGCTGGATTGGAGCAGATGTTTGCCATCTTAACCTTCACAAGACATTCTGCATCCCACATGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACATCCCGTGGTACCCACGGGCGGGATTCCTGCCCCTGACAAGACTCAGCCTCTTGGTACCATTTCTGCAGCGCCTTGGGGCTCAGCACTCATATTGCCAATTTCGTATACTTACATAGCCATGATGGGTTCGAAAGGACTCACTGAAGCATCCAAGATAGCCATTTTGAATGCTAACTACATGGCCAAACGATTAGAGAATCAATACCCTGTTCTTTTCCGAGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACCTGAGAAGCTTTAAGAATACTGCTGGTATAGAACCTGAGGATGTGGCCAAGCGCCTTATGGACTATGGGTTCCATGGACCAACTATGTCATGGCCCGTGCCTGGTACTCTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTATTTCCATTCGAGAAGAAATCAGAGAGATAGAGAATGGGAAAGCTGATATTAATAATAATGTGCTCAAGGGAGCCCCTCATCCTCCTTCATTGCTTATGGGAGATGAATGGACCAAACCATACTCTCGGCAATATGCAGCATACCCAGCTCCCTGGCTCCGCGTTTCCAAGTTCTGGCCTACCACAGCACGTGTGGACAATGTATACGGAGACCGTAACCTCATCTGCACCCTCCTCTCGGTGTCGCAGACTGCTGAGGAACAAGCTGCTGCATCTGCTTAG 3162 0.4614 MERARRIANRAILRRLVSQAKQYRQNESSLNSSTPVLYTPSRYVSSLSPSAFRGRGSKSENLQGGNALSRNVAFWAFQSRSISVEALKPSDTFPRRHNSATPEEQSKMAQSCGFDNLDSLIDATVPKSIRLNDMKFNKFDEGTTESQMIEHMQYLAAKNKIFKSYIGMGYYNTYVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLSGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFIIATNCHPQTIDICMTRAEGFDLKVVTADVKDIDYKSGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIGQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKVKTANAHAIADAAYKSEINLRVVDGNTITVSFDETTNLEDVDKLFKVFAGGKPVSFTAASLAPEVQTTLPSGLTRESPYLTHPIFNTYHTEHELLRYIHQLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPGFTDIHPFAPAEQVQGYQEMFDNLGDLLCAITGFDSFSLQPNAGASGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVPVGTDAHGNINIQELKKAAETNKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPDKTQPLGTISAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLENQYPVLFRGVNGTVAHEFIIDLRSFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIREIENGKADINNNVLKGAPHPPSLLMGDEWTKPYSRQYAAYPAPWLRVSKFWPTTARVDNVYGDRNLICTLLSVSQTAEEQAAASA 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0777 1053 TIGRFAM gcvP: glycine dehydrogenase 96 1037 IPR003437 GO:0004375|GO:0006544
Lele26g0777 1053 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 87 1044 IPR003437 GO:0004375|GO:0006544
Lele26g0777 1053 SUPERFAMILY PLP-dependent transferases 96 522 IPR015424 -
Lele26g0777 1053 Gene3D - 603 855 IPR015421 GO:0003824
Lele26g0777 1053 Gene3D - 177 436 IPR015421 GO:0003824
Lele26g0777 1053 Gene3D Aspartate Aminotransferase, domain 1 856 991 IPR015422 GO:0003824
Lele26g0777 1053 FunFam Glycine cleavage system P protein 429 518 - -
Lele26g0777 1053 SUPERFAMILY PLP-dependent transferases 561 1038 IPR015424 -
Lele26g0777 1053 CDD GDC-P 565 960 IPR020581 GO:0004375|GO:0006546
Lele26g0777 1053 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 853 991 - -
Lele26g0777 1053 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 604 843 - -
Lele26g0777 1053 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 176 436 - -
Lele26g0777 1053 Pfam Glycine cleavage system P-protein 543 815 IPR020581 GO:0004375|GO:0006546
Lele26g0777 1053 Pfam Glycine cleavage system P-protein 96 522 IPR020581 GO:0004375|GO:0006546
Lele26g0777 1053 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 78 1044 IPR020581 GO:0004375|GO:0006546
Lele26g0777 1053 CDD GDC-P 145 522 IPR020581 GO:0004375|GO:0006546
Lele26g0777 1053 Coils Coil 960 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0777 Lele-ChrLele26 4936802 4941715 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0777 26 4936802 4941715 Lele27g1307 27 19798754 19803764 hybridization
Lele26g0777 26 4936802 4941715 Lele28g0764 28 4859335 4864246 hybridization