Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0352 ATGGACTCCATAATGAGCAAGCTCCGTAATCTGGATGCCTATCCTAAAATCAACGAGGATTTCTACAGCCGCACCCTCTCCGGTGGCCTCATCACCATTGCCTCCTCCGTCCTCATGCTCCTGCTTTTCATATCCGAGCTTCGATTGTATCTTCATGCGGTAACTGAGACCAAACTAGTTGTAGATACTTCGAGAGGAGAGACGCTACGGATCAATTTTGATGTGGCATTTCCTGCCCTACCTTGTTCAATACTCAGTCTAGATGCCATGGACATCAGTGGAGAGCAACATTTAGATGTAAAACATGATATTGTCAAGAAAAGATTAGACTCTCATGGGAACGTTATAGAAACAAGGCAGGATGGGATTGGTTCCCCCAAGATTGAAAAGCCTTTGCAAAGACATGGAGGCAGGCTTGAGCATAATGAAACATACTGTGGTTCCTGTTATGGTGCTGAAGCGACAGATGAGGATTGTTGTAATTCCTGTGAGGAAGTTCGTGAAGCTTACCAGAAAAAAGGTTGGGCGATATCAAATCCAGATTTAATTGATCAGTGCAAAAGAGAAGGATTCTTGCAAAGGATCAAGGATGAAGAAGGTGAAGGTTGTAATGTATATGGATTCTTGGAAGTAAATAAAGTGGCTGGAAATTTCCATTTTGCCCCAGGGAAGAGCTTTCAGCAATCTGGTGTCCATGTGCATGACCTGCTTGCTTTTCAAAAGGACTCATTTAATATTAGTCACCAGATCAACAGATTAGCGTTTGGAGAGTATTTCCCTGGTGTTGTGAATCCTCTTGATGGTGTGCATTGGACACAACAAACACCAAGTGGGATGTATCAATATTTTATAAAGGTTGTGCCTACTGTATACACTGATGTAAACGGGCACACAATCCAATCAAACCAGTTCTCTGTGACAGAACACTTGAGAACTGGAGATGTGGGTCGTCTTCAGTCCCTGCCCGGAGTTTTCTTCTTCTATGACCTTTCCCCAATTAAGGTTACTTTTGCGGAAGAACATATCTCATTCTTACACTTCCTCACTAACGTGTGCGCCATAGTTGGAGGTGTTTTCACGGTTTCTGGAATACTGGATTCGTTTATCTACCATGGTCAAAAGGCAATCAAGAAGAAGATGGAAATTGGCAAATTTAGTTGA 1161 0.4272 MDSIMSKLRNLDAYPKINEDFYSRTLSGGLITIASSVLMLLLFISELRLYLHAVTETKLVVDTSRGETLRINFDVAFPALPCSILSLDAMDISGEQHLDVKHDIVKKRLDSHGNVIETRQDGIGSPKIEKPLQRHGGRLEHNETYCGSCYGAEATDEDCCNSCEEVREAYQKKGWAISNPDLIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNISHQINRLAFGEYFPGVVNPLDGVHWTQQTPSGMYQYFIKVVPTVYTDVNGHTIQSNQFSVTEHLRTGDVGRLQSLPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKKKMEIGKFS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0352 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Lele26g0352 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Lele26g0352 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 385 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0352 Lele-ChrLele26 2112562 2117526 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0352 26 2112562 2117526 Lele27g1749 27 22710068 22715100 hybridization
Lele26g0352 26 2112562 2117526 Lele28g0351 28 2131985 2136929 hybridization